Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2980 ATGGATATCAGAGAAATGAATAATAAAAAAGATCAACAAGTTGAGACTCGTTGGGTTCCCACTACTCCCATAAAACCCACTCTTCAAACAATGCCGATCTACGCACCAGAACAGGAAGATCAGCCCCAGATACCCACTCATGGTGATGGAGCAGTTGCATGTTCCAAATTCACAGGTTTTATGGAAAGGTCCTGTATTGGGTCAGTAAATGAAGGTAGAATGAAAAACATTGTTGGTGAAAATAGTGAAGCTTGTGCAAAGACAGTATCTGGTGATCTTCCTGGACTTGGTCATATGAGTTTTTCTCAACTTATAGCGACCATGCAAGAGAATGCAACATCAGCTAATTTGAATGCAACCCAATCAGGCAATGGATCGATGAATCCAGCTTTTTCTTCGTTGGATTCACAGATCAACTACAACAGAGCAGCCATGAATAACACCGGAAATCTTCAGGGCACATCGTCAGTTGGTTGCTCACAAATTGCATCATTGTCAATGAATATGGAAAAAAATAATCCTGCGGAAGAATTTGATGTTGCTTGCACACCAGTAAAGATGGATGCCATCCAGATAGAAAACACACCACAATCAAAACAAAAGAGAAGAAAGCACCGTCCCAAGGTCATTGTAGAAGGCAAGCCAAAACGAACTCGAAAGCTAGCTGAAGAAAAGAATGTTCAGCTCAAAGAAAATTCAACTGGCAAAAGAAAATACGTGAGAAGAAAAGGAATAAACAAGACCCCTACTACTCCAGCAGAAGAAACAATTAAAGACTTGACGCCAGACTCTACAAAAAAGTCTTGTAAAAAGACTTTATTTGATGGATTTACTGGCACTGAAAATGCAACAGCAGAAGGGACAGCAAGTTGTGACAAAGAAGCACAAGATCCGTCGCAAAGCAATCCTCCCGTAGCACAACCAATAGAAAAGACGATCAAGAAGAGGGGTCGGAAGAAGAAAACGCCCAACATGTCTTATCCAACAGAGACCACAGTAGAATTCAGTGAAGCATTAAGACGTGTACCTAACACAAGATCAAGAAGTAATAAGAAATCCAAAGAAGAAAGCTCTACAAGTGGAAATTTTTACATAGAATTACCCATCGGCACACAAGATCATAACACATCCGCTAAGAGGATGAGATATAGCAGAACAAATGCAACAAATAAGGTATCATATGATCATGAGCGATCAACTGAAGATATCAAAACGTCAAGTATATTTTCTCCAGAAAGCACTTCGCAGGAGACAAAGCCCATTGTCAATTGCAGTTTTAAAGATAACAAAAACAAAAGAGATCAGACAACTGAAAATGCAGAGAGTCCAAATACGAGTGGCAGGAATATCATTGGGGTACATCATAATGATTTGTCTTTGTACAGAACGAAATCTAAAACAGCGAGTACTTCTGCCGCAACTAATCAAAATGAAGTAGAAATGATAATTTCTCCGCAAGATGCGCGCAGACTTGATTACGCATCCAGTTCTGACAACTCTGAATGTAATTCTGATTGCGACAAGTTTTACAAGTTCATCTCAATGGTGCGAAGTTGGGAAGCAGTGGACAAATCATTAGATATTTCTGATGTAGATGCTATAACAACGCAATTTAAAAAATTGAAAATCAAAACACAAGAGGATGCAATAATAAGGTATAAACAAAAAAAACAAAAACAAAAGCAAAAGCGTCTTGATGGCGCCATCATTCCGTTTGAAGGCCAAGTTGTTCCTTTCAAGAAACAATATCCACGCGCTAGGGTTAACCTTGATGAAGAAACTAATAGAGTGTGGAAGCTTTTGATGTTGGATATAAACAGCCATGGAATTGATGGAGAAGATGAAGACAAGTCCAAATGGTGGGAAGAAGAGCGAAATGTATTTCGAGGGAGGGCAGACTCGTTTATTGCAAAAATGCATCGTGTACAAGGAGACAGACGCTTCTCTCGCTGGAAAGGATCAGTGGTGGATTCGGTGGTGGGGGTCTTCCTCACCCAAAATGTCTCAGACCATCTCTCAAGTTCTGCATTCATGGCCCTGGCGGCTCGATTCCCCAACAAATCACAAGTAAATGTTGGGGCGCCAGTAGAGATCTCAGAGGGGGATGCGCCGTTGAATCCATCCGTTCATGACGCCACTGAGCATTCTGGACACAAGATAACACAGTGGAGTGTCCCAGAAATGACTCAGAGAACGGGGTTTAATGATATGGTGGCATCCCGAAGCTCTGGGGTTTCCCAAACTGGCGAAGCTTCAAATGGGCAGAACGATGAGAAGATGGGATCCTGTTCGGGGGGCCACTCAGAAGTGGAGAAGAACACTTCTGTCAATATCACCCAGCAGGCAGAAAATTCAACCAAGGTTCAGGAAGAAGCTGACACAAAAAGAGATGAAGCAACTGAGAAGCTAACATCTGGGGACCTGAAGAATGGCAGCCCCAAAGAAAATACTCAGGTCCCCCTCAGAGCATCCACCTTCCCAACCCAGGAATCCGTCCTCAGCTCAGAAAATGAAAAGAGCATGCCTTGCTGCCCAGACAACGGAGCTGAAATGTCTCAAAGGTCTCACTCTCAAAGGATTGTGGCTCCAGCACAGGCAACTGCTGGTGCCCACAAAAGTGAAGCAAGCAATGAGGCCCGAGAGACAAGTTCAGCAAAAAAAGACAGCAAGGGCAAAGGAAAAGAGCAAAAGGACGAAATCAACTGGGATAGCTTGCGAACAGCCGCGCAAGCTATAGCAGGGAAGAGAGAGAAGACATGGAACACCATGGATTCTCTCGACTGGGATGCTGTGAGATGTGCAGATGTTAGCACAATCTCAGATGTGATCAAAGAAAGGGGCATGAACAACAGGCTCGCTGAACGCATTCAGCTCTTCCTGAATCGGCTGGTTGAAGATCACGGTGATATTGACCTAGAGTGGCTGAGAGACGTCGCCCCGGACAAAGCAAAGGAGTTTCTGCTCAGTATAAAGGGACTGGGACTGAAAAGTGTGGAGTGTGTGAGGCTCCTAACCCTGCACCACCTTGCCTTTCCTGTGGATACCAATGTTGGAAGAATAGCAGTAAGACTTGGATGGGTACCGCTGCAGCCACTTCCTGAGACACTACAGTTGCATCTCCTGGAACTGTACCCCATTTTGGAGACCGTACAAAAATATCTGTGGCCTCGTCTGTGCAAACTAGATCAAAAAACATTATACGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGCACAAAACACAAACCAAATTGCAATGCATGTCCATTGAAAGGGGAGTGTAGACACTTTGCTAGTGCTTTTGCAAGTGCAAGACTTGCCTTACCAGGGCCAGCGCAGACAAGTATAGTCAGTACCTCCGGAAACAATCCGACAGATCAGAATCCAACGGATCAAAATCCGATGGATCAGAACCCGATGGATCAGAATCCGGCGGTAAACATCGCTCAGTTGCACTTGCCCCTTCTTGAGAATCCAAACCAAGGAGCAGAAATTCTACAAGCAGAAGTTGCCAAACAGCTAAAATCAATATCTGAAAAGAATATCTGCCATCCTATTATTGAAGAGCCAACAACCCCAGAGGCAGAATGCTCACAAGTACCAATTCATGATATTGAGGATGCCTTCTGGGAGCCACGGGAAATTCCTCCCATCGACCTTGATCTAGAGGAGTTTACCCTGAATTTAAAAAATTATATGCAAGGAAATATGGAACTTCAAGAAGCGGAAATGTCAAGGGCATTGGTAGCTTTGACTCCAAAAGCTGCTAACATTCCTATGCCTAAGTTAAAGAATGTGAACCGATTACGGACAGAGCATTGCGTTTATGAACTCCCAGATACGCATCCTCTTCTGGAAGGGTGGGACAAACGAGAGGCAGATGATCCAGGCAAATATCTTCTTGCTATATGGGCTCCAGGGGAGACAGCAAATTCTATACAACCACCTGAAAGAAAATGCAGCTATCAAGAAAGTGGCCAACTCTGTAATGAGAAAGAATGCCTTTCCTGCAACAGTGTTCGGGAAGCAGATTCGCAAACAGTTAGAGGGACAATCCTGATACCGTGTCGAACAGCTATGCGAGGAAGATTTCCGCTAAATGGCACCTATTTCCAAGTCAATGAGGTATTTGCTGACCATGAATCGAGTAAAAATCCAATCAGCGTTCCGCGAAGTTGGATCTGGAACCTGAACAGGCGAACAGTATATTTTGGAACCTCTGTAACATCAATATTTAAAGGTTTAACAACGCCTGAAATTCAACAATGCTTCTGGAGAGGGTATGTCTGTGTGCGGGGATTTGATAGAGCAACTCGAGCACCGCGTCCTCTAAAAGCGAGACTGCATTTCCCAGCAAGCAAGATGGAGAAGGCCACAGGGACTACAAGGAAAAAGTCGACTGCCACAAAATCAGAAGGGGCAAAAACAAACCCAGAACAACCAGAAGTGGTTTCTGGGAGCCAAAGTCTTCAGGAGGGGGGAAAACCCAAAGAAAATCCATCCTTGTTCATGTCATAA 4527 0.4383 MDIREMNNKKDQQVETRWVPTTPIKPTLQTMPIYAPEQEDQPQIPTHGDGAVACSKFTGFMERSCIGSVNEGRMKNIVGENSEACAKTVSGDLPGLGHMSFSQLIATMQENATSANLNATQSGNGSMNPAFSSLDSQINYNRAAMNNTGNLQGTSSVGCSQIASLSMNMEKNNPAEEFDVACTPVKMDAIQIENTPQSKQKRRKHRPKVIVEGKPKRTRKLAEEKNVQLKENSTGKRKYVRRKGINKTPTTPAEETIKDLTPDSTKKSCKKTLFDGFTGTENATAEGTASCDKEAQDPSQSNPPVAQPIEKTIKKRGRKKKTPNMSYPTETTVEFSEALRRVPNTRSRSNKKSKEESSTSGNFYIELPIGTQDHNTSAKRMRYSRTNATNKVSYDHERSTEDIKTSSIFSPESTSQETKPIVNCSFKDNKNKRDQTTENAESPNTSGRNIIGVHHNDLSLYRTKSKTASTSAATNQNEVEMIISPQDARRLDYASSSDNSECNSDCDKFYKFISMVRSWEAVDKSLDISDVDAITTQFKKLKIKTQEDAIIRYKQKKQKQKQKRLDGAIIPFEGQVVPFKKQYPRARVNLDEETNRVWKLLMLDINSHGIDGEDEDKSKWWEEERNVFRGRADSFIAKMHRVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMALAARFPNKSQVNVGAPVEISEGDAPLNPSVHDATEHSGHKITQWSVPEMTQRTGFNDMVASRSSGVSQTGEASNGQNDEKMGSCSGGHSEVEKNTSVNITQQAENSTKVQEEADTKRDEATEKLTSGDLKNGSPKENTQVPLRASTFPTQESVLSSENEKSMPCCPDNGAEMSQRSHSQRIVAPAQATAGAHKSEASNEARETSSAKKDSKGKGKEQKDEINWDSLRTAAQAIAGKREKTWNTMDSLDWDAVRCADVSTISDVIKERGMNNRLAERIQLFLNRLVEDHGDIDLEWLRDVAPDKAKEFLLSIKGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPETLQLHLLELYPILETVQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKHKPNCNACPLKGECRHFASAFASARLALPGPAQTSIVSTSGNNPTDQNPTDQNPMDQNPMDQNPAVNIAQLHLPLLENPNQGAEILQAEVAKQLKSISEKNICHPIIEEPTTPEAECSQVPIHDIEDAFWEPREIPPIDLDLEEFTLNLKNYMQGNMELQEAEMSRALVALTPKAANIPMPKLKNVNRLRTEHCVYELPDTHPLLEGWDKREADDPGKYLLAIWAPGETANSIQPPERKCSYQESGQLCNEKECLSCNSVREADSQTVRGTILIPCRTAMRGRFPLNGTYFQVNEVFADHESSKNPISVPRSWIWNLNRRTVYFGTSVTSIFKGLTTPEIQQCFWRGYVCVRGFDRATRAPRPLKARLHFPASKMEKATGTTRKKSTATKSEGAKTNPEQPEVVSGSQSLQEGGKPKENPSLFMS* 1509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 788 804 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 805 841 - -
Ahy12g2980 1508 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 141 1468 IPR044811 GO:0019104|GO:0035514|GO:0080111
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 278 307 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 1448 1508 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 1467 1498 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 740 902 - -
Ahy12g2980 1508 Pfam RRM in Demeter 1353 1453 IPR028925 -
Ahy12g2980 1508 Gene3D - 981 1108 IPR023170 -
Ahy12g2980 1508 Coils Coil 1225 1245 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 244 266 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 740 787 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 874 902 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 278 362 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 404 425 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 1115 1140 - -
Ahy12g2980 1508 SMART endo3end 907 1079 IPR003265 GO:0006284
Ahy12g2980 1508 SUPERFAMILY DNA-glycosylase 630 1102 IPR011257 GO:0003824|GO:0006281
Ahy12g2980 1508 Pfam Permuted single zf-CXXC unit 1319 1350 IPR028924 -
Ahy12g2980 1508 SMART ccc3 1080 1100 IPR003651 GO:0051539
Ahy12g2980 1508 Coils Coil 543 563 - -
Ahy12g2980 1508 MobiDBLite consensus disorder prediction 391 451 - -
Ahy12g2980 1508 CDD ENDO3c 927 1046 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2980 Ahy-Chr12 119397044 119404997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2980 - - aip:107626416 2551.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2980 12 119397044 119404997 Ahy12g2980 12 119397044 119404997 ECH
Ahy12g2980 12 119397044 119404997 Ahy2g2565 2 101799119 101807072 hybridization
Ahy16g1796 16 83789827 83799957 Ahy12g2980 12 119397044 119404997 PCT
Ahy6g1567 6 59838256 59848525 Ahy12g2980 12 119397044 119404997 PCT
Ahy12g2980 12 119397044 119404997 Ahy16g1796 16 83789827 83799957 PCT
Ahy12g2980 12 119397044 119404997 Ahy6g1567 6 59838256 59848525 PCT