Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1504 ATGAAAGGCATTGATATCTTCTGCGCTTCACAATCCTCAACAGCCATATCTCATGCCATGGAACAAGCCTCCTCTTCTTCTTCTTCTTCCAACACCTTCCATCTCGGTGGCAGGGCCCTCGACCGCCACAACCCCATCATCATGGATTCTAGAAGAACACCTTCTAGAGACTTCACTCTCCCACCGACTCCCTCTTCCGTTGACCCCAAACCTGGCCACCATGATCTCCAAAAGGGTAAGAAAAAATCATCATCATCGTCTTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTAAGAGAAGTTCAAGAAAGGGTCATGATAAGAAAAAGAGTGTGACAGAGAATAAGGTGACTGAACATTTTACCAACAATCACTCTTCAAAGGCCATTGATAGTGTTGTGAGAAGGAGTTGGGTCACTCCTGCTGGTTCATCAAGGTATCTGCTAAGTGACATATCAGATTATGATCCTGTTTTGGCTCTAAATACTTCTAATATTAATGTTGATGATGATAAAAAGAAGGGTCATCAAGTTGTTCATAATCAAGATGAAACAATAAAACATCATCATGCATCTAATTCTAAACCCTCCAGCTCCTCCTCTGCTCCAAAATCTGCTTCGTCAAACCAGGTTGTGGTATTAAGGGTTTCTCTACATTGCAAAGGTTGTGAAGGCAAAGTGAGGAAGCATCTCTCTAGAATGCAAGGAGTTACATCCTTCAACATAGATTTTGCGGCAAAGAAGGTGACAGTAGTTGGGGATGTGACTCCATTGAGTGTATTGGCAAGCATATCAAAGGTTAAGAATGCACAATTTTGGCCACCACCACCTTCTGGATCCGCTAGTAATCTAGAATCAAGAAAAAGAAACTTGGCCTAA 879 0.4209 MKGIDIFCASQSSTAISHAMEQASSSSSSSNTFHLGGRALDRHNPIIMDSRRTPSRDFTLPPTPSSVDPKPGHHDLQKGKKKSSSSSSSPSSSSSSSSKRSSRKGHDKKKSVTENKVTEHFTNNHSSKAIDSVVRRSWVTPAGSSRYLLSDISDYDPVLALNTSNINVDDDKKKGHQVVHNQDETIKHHHASNSKPSSSSSAPKSASSNQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPPPPSGSASNLESRKRNLA* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1504 292 ProSiteProfiles Heavy-metal-associated domain profile. 210 267 IPR006121 GO:0046872
Ahy16g1504 292 MobiDBLite consensus disorder prediction 275 292 - -
Ahy16g1504 292 MobiDBLite consensus disorder prediction 82 99 - -
Ahy16g1504 292 PANTHER COPPER CHAPERONE 1 283 - -
Ahy16g1504 292 PANTHER OS08G0405700 PROTEIN 1 283 IPR044526 -
Ahy16g1504 292 SUPERFAMILY HMA, heavy metal-associated domain 210 267 IPR036163 GO:0046872
Ahy16g1504 292 MobiDBLite consensus disorder prediction 271 292 - -
Ahy16g1504 292 MobiDBLite consensus disorder prediction 17 35 - -
Ahy16g1504 292 MobiDBLite consensus disorder prediction 184 208 - -
Ahy16g1504 292 CDD HMA 213 266 IPR006121 GO:0046872
Ahy16g1504 292 Pfam Heavy-metal-associated domain 214 266 IPR006121 GO:0046872
Ahy16g1504 292 Gene3D - 207 271 - -
Ahy16g1504 292 MobiDBLite consensus disorder prediction 192 208 - -
Ahy16g1504 292 MobiDBLite consensus disorder prediction 17 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1504 Ahy-Chr16 33682182 33684570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1504 - - gmx:100786319 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1504 16 33682182 33684570 Ahy6g1362 6 21785637 21787953 hybridization
Ahy16g1504 16 33682182 33684570 Ahy12g1179 12 32483169 32488484 PCT
Ahy16g1504 16 33682182 33684570 Ahy2g1069 2 30615517 30626330 PCT
Ahy12g1179 12 32483169 32488484 Ahy16g1504 16 33682182 33684570 PCT
Ahy2g1069 2 30615517 30626330 Ahy16g1504 16 33682182 33684570 PCT