Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1179 ATGTTCTGTGCTTCACAAGCCTCAACGGCAATTTGTGCCGCCATGGATGAAGCCTCATGCTCTTCTTCCACCAACACCATTCAACTCGGAGGCAAAGCCATCGACCGCCACAACCCCATCATCTGCCATTCTAGAAGAGCAACCCTCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTCACCCACCAATCAACCCTCAGAAGAAAAGATCTTCTTCAAAACCATCATCAAGTAATGCAGAGAATAAGAACAAGAACAGTGCTAAAAAGGGTGGTCATCATGATCAGAAGAAGAAAAACGTAGCAGAAAATACTGTCTACTCTTCTAAGCAGATTGATAGCGTTCTGGCGAGGAGAAGTTGGATTAAGCAAAATAATAATAATGGTGATTTATTCACTACTACTCCTCCTGTTGGTTCAACAAGGTGTTTGCTCAGTGACACTGCTTTCTTCGATGATAACAATGATGGTGTATCAGATTTTCATGATCCAGCTTTGGTATTAAATAATAATAATAATAATAAAAAGGGTCAAGATGAAATTCAAACTGAAAACAACACTTTATCTAAACCTTCTACCTCTTCCCATCATCCCAAGTCTGCTTCTTCAGACCAGGAAGTTGTCCTAAGGGTTTCTTTGCACTGCAAGGGTTGTGAAGGGAAAGTGAGGAAACATCTCTCCAAAATGCAAGGAGTTAGTTCCTTTAAAATAGATTTTGCTTCAAAGAAGGTGACAGTTGTTGGGGATTTGACTCCATTGAGTGTGTTGACAAGCATATCAAAAGTGAAGAGTGCACAATTTTGGTCAGCAACTACTGATTCAGCTGTTGGATCTAGTTATTATGGTACTTTAGAAACAAACAACAAATATGTTATCTAA 879 0.4005 MFCASQASTAICAAMDEASCSSSTNTIQLGGKAIDRHNPIICHSRRATLSSSSSSSSSSSHPPINPQKKRSSSKPSSSNAENKNKNSAKKGGHHDQKKKNVAENTVYSSKQIDSVLARRSWIKQNNNNGDLFTTTPPVGSTRCLLSDTAFFDDNNDGVSDFHDPALVLNNNNNNKKGQDEIQTENNTLSKPSTSSHHPKSASSDQEVVLRVSLHCKGCEGKVRKHLSKMQGVSSFKIDFASKKVTVVGDLTPLSVLTSISKVKSAQFWSATTDSAVGSSYYGTLETNNKYVI* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1179 292 PANTHER COPPER CHAPERONE 1 277 - -
Ahy12g1179 292 SUPERFAMILY HMA, heavy metal-associated domain 207 262 IPR036163 GO:0046872
Ahy12g1179 292 MobiDBLite consensus disorder prediction 46 106 - -
Ahy12g1179 292 PANTHER OS08G0405700 PROTEIN 1 277 IPR044526 -
Ahy12g1179 292 MobiDBLite consensus disorder prediction 46 85 - -
Ahy12g1179 292 MobiDBLite consensus disorder prediction 167 205 - -
Ahy12g1179 292 CDD HMA 208 261 IPR006121 GO:0046872
Ahy12g1179 292 Pfam Heavy-metal-associated domain 209 255 IPR006121 GO:0046872
Ahy12g1179 292 Gene3D - 202 266 - -
Ahy12g1179 292 ProSiteProfiles Heavy-metal-associated domain profile. 212 265 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1179 Ahy-Chr12 32483169 32488484 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1179 - - aip:107625211 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1179 12 32483169 32488484 Ahy2g1069 2 30615517 30626330 hybridization
Ahy16g1504 16 33682182 33684570 Ahy12g1179 12 32483169 32488484 PCT
Ahy6g1362 6 21785637 21787953 Ahy12g1179 12 32483169 32488484 PCT
Ahy12g1179 12 32483169 32488484 Ahy16g1504 16 33682182 33684570 PCT
Ahy12g1179 12 32483169 32488484 Ahy6g1362 6 21785637 21787953 PCT