Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1429 ATGGCTGAAGATAATTCATCAAACTCCAACAACCTTAGAATCACCATTGAAAGAAACCCTTCACAGTCACGCCTCTCTGAACTCAACATCAAGTGTTGGCCCAAATGGGGTTGTTCTCCTGGGAAGTACCAGTTGAAATTTGATGCAGAAGAGACATGCTATTTGCTGAAAGGGAAAGTGAAGGCATACCCAAAAGGTTCATCAGATTTTGTTGAGTTTGGTGCTGGTGACCTTGTTACCATTCCAAAGGGACTTAGTTGCACTTGGGATGTTTCTGTTGCAGTTGATAAGTACTACAAGTTTGAATCTGAATCTTCTTCTTCTTCGTCTTCATGA 336 0.4137 MAEDNSSNSNNLRITIERNPSQSRLSELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYPKGSSDFVEFGAGDLVTIPKGLSCTWDVSVAVDKYYKFESESSSSSSS* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1429 111 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 4 108 - -
Ahy16g1429 111 Gene3D Jelly Rolls 2 101 IPR014710 -
Ahy16g1429 111 PANTHER OS04G0445200 PROTEIN 4 108 - -
Ahy16g1429 111 SUPERFAMILY RmlC-like cupins 21 99 IPR011051 -
Ahy16g1429 111 Pfam EutQ-like cupin domain 26 99 IPR008579 -
Ahy16g1429 111 CDD cupin_TM1112-like 33 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1429 Ahy-Chr16 29265361 29266087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1429 - - gmx:100793722 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1429 16 29265361 29266087 Ahy6g0045 6 707143 707873 hybridization
Ahy16g1429 16 29265361 29266087 Ahy12g1059 12 24764479 24765663 PCT
Ahy16g1429 16 29265361 29266087 Ahy2g0968 2 22107465 22108677 PCT
Ahy12g1059 12 24764479 24765663 Ahy16g1429 16 29265361 29266087 PCT
Ahy2g0968 2 22107465 22108677 Ahy16g1429 16 29265361 29266087 PCT