Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1059 ATGGCTTCAGATTCCAGTAATTCAAACCTTAGAATCATCGTTGAAAGCAATCCTTCAGAGTCACGCCTAGCTGAGTTGAATATTAAGTGCTGGCCCAAATGGGGTTGCGCTCCAGGGAAATACCAATTGAAATTTGATGCAGAGGAGACATGTTATTTGTTGAAAGGGAAGGTGAAGGCATATCCAAAAGGGTCATCAGATTTTGTGGAGTTTGGTGCTGGGGACCTTGTGATTTTACCAAAAGGACTTAGTTGCACTTGGCATGTTTCTGTTGCCGTAGACAAGTACTACAAATTTGAGTCATCAAATCATTCTTCTTCTTCTTCTTCTTGA 333 0.4114 MASDSSNSNLRIIVESNPSESRLAELNIKCWPKWGCAPGKYQLKFDAEETCYLLKGKVKAYPKGSSDFVEFGAGDLVILPKGLSCTWHVSVAVDKYYKFESSNHSSSSSS* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1059 110 Pfam EutQ-like cupin domain 24 97 IPR008579 -
Ahy12g1059 110 PANTHER RMLC-LIKE CUPINS SUPERFAMILY PROTEIN 7 106 - -
Ahy12g1059 110 Gene3D Jelly Rolls 2 99 IPR014710 -
Ahy12g1059 110 SUPERFAMILY RmlC-like cupins 29 97 IPR011051 -
Ahy12g1059 110 CDD cupin_TM1112-like 31 99 - -
Ahy12g1059 110 PANTHER OS04G0445200 PROTEIN 7 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1059 Ahy-Chr12 24764479 24765663 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1059 - - gmx:100793722 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1059 12 24764479 24765663 Ahy2g0968 2 22107465 22108677 hybridization
Ahy16g1429 16 29265361 29266087 Ahy12g1059 12 24764479 24765663 PCT
Ahy6g0045 6 707143 707873 Ahy12g1059 12 24764479 24765663 PCT
Ahy12g1059 12 24764479 24765663 Ahy16g1429 16 29265361 29266087 PCT
Ahy12g1059 12 24764479 24765663 Ahy6g0045 6 707143 707873 PCT