Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1373 ATGTTGCTGCTTCCGCGAATGTCTTCAAAGCTAGCACGATCATTGCTGCTTCTGCTTTTCGCATTTTCGATCTGCGATGCGGTCGCGCTTCCCGGCCCTATCTCCGATCGTCACCGTTCTGCTGCTTTGGAGCTCTTCGCCCCTCAGCACGGTTCATTTGCAAGTTTAGAAGAATCCTATGAGGCCCTTAGAATCTTTGAGATTCTTGCGGTTAGGGAGAAGCCTGATGTGAGGGCAACAACTTGTCCAAAAGTGTTGGAAAATCTTGTCTCATCCACCCCACTGAAGGATTTGTTCTATGCCTTAAAAGTTAATGGCATATTAAAATGCAAGGTTAATGGTGACATTTTCAAGGATATTGCTTCGAGACTTAAAGCTACTGTCAAGGATGCAAAGACTTTAATTGACCTGTATTACTCAATAGGAAGTTTGCTTCTTATAAAGGACCAGGCTTCTGATGTTGATGTGCTTCTTGCCGATGCTGATGGGACCTTCCACTCAATCAAGGCGCTAAGCCAAAGTGATGGAAAATGGCGCTATACTGATAAACCAGAATCTAGTACTTATGCTGCAGGATTGGCTCTAGAAGCACTGGCTGGAGTGATCACATTAGCGTCTTCTGAGATTGATCAGTCTAGGGTCAATTTAGTGAAAAATGATATACTGAAGCTTTTTGACAGCATTGAAAAATATGATGATGGAACTTTTTATTTTGATGAGAAACTGGTTGGTGGACATGAGCATCAAGGTTCTATTTCCACAACTTCTTCAGTTGTTCGTGGGGTTTTCGCATTTGCTGCTGTAACTTCTGGAAAAATAAATCTTCCAGGTGATAAAATATTGGGCTTAGCAAAATTTTTTCTGGGCATTGGAATCCCAGGAGATGCGAAGGACTTATTCAATCAAATAGAATCATTAGCTCTTCTAGAGAGCAACAGGATTTCCATTCCGTTGATATTGTCACTTCCTGCAAGTGTTTATTCATTATCAAATAAAGATCAACTCAAGGTTAGGGTGAATACAGTGCTTGGTTCAGCTGCACCTCCTTTAACAGTTAAGCTTGTCCGGGCTTTCAGCACTGTTGCTAAAGATTCGGCTGTTATTCAGAACAAGGACCTCAAATATGACCAGAATAGCGGACATCATGTATTGGACGTTTTACCAGATAAAGTGGATGTGGGTATTTATGTGTTTGTTTTTGAGATGGTGCTTCATGATGCTGACGGAGAAAAAGTCTATGCTACCGGAGGCCAAATTCATGTGCCAATATATGTCACTGGCATTGTTAAAGTTAGCAATGCAGAAATTGCAGTTCTGGACAATGATCTTGGAAGTATTGAAACCCAGAAAACGCTAGATTTGGCTGGAAATGACATTGTTTCGCTCACAGCTAACCACCTGCAAAAATTCCGTTTTTCTTTCCAATTGACAACCCCTCGTGGTCATGCATTTAAGCCTCATCAGGCATTTCTCAAGTTGAAACATGAGACAAAGTATGAGCACATCTTTGTTGTTGGAAATGCTGGCAAGAAATTCGAGATTGTTCTTGATTTTCTTGGCTTGGTGGAGAAATTTTACTATCTCTCTGGCAGATATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCCACTTGGCCATCTTGAATTAGATCTTCCAGAAGCACCTACTAGCAAGGCACCCCGTCTTCCTCCACTAGCTGTTGATCCATACACGAGATATGGGCCCAAAGCTGAGATAACCCACTTATTCAGGACTCCTGAAAAACGACCACCAACACAACTCTCTCTTATTTTCTTGAGTTTGACCCTTCTGCCCTTAATTGGCTTTTTGGTTGGGCTATTGCGCTTGGGGGTAAACTTGAGGAACTTTCCTTCTTCAGCAGCACCTGCTACATATGCCATCCTGTTCCATCTTGGCATTGCCGCGGTTCTGGTTCTTTATGTACTTTTCTGGTTGAAGCTGGACTTGTTCACCACACTTAAAACAACAGCACTTCTTGGAGTTTTTCTGTTGTTTGTGGGACACAGAATCCTTTCGCATCTTGCTACCACATCAGCCAAGCTGAAATCTGCATAA 2097 0.4239 MLLLPRMSSKLARSLLLLLFAFSICDAVALPGPISDRHRSAALELFAPQHGSFASLEESYEALRIFEILAVREKPDVRATTCPKVLENLVSSTPLKDLFYALKVNGILKCKVNGDIFKDIASRLKATVKDAKTLIDLYYSIGSLLLIKDQASDVDVLLADADGTFHSIKALSQSDGKWRYTDKPESSTYAAGLALEALAGVITLASSEIDQSRVNLVKNDILKLFDSIEKYDDGTFYFDEKLVGGHEHQGSISTTSSVVRGVFAFAAVTSGKINLPGDKILGLAKFFLGIGIPGDAKDLFNQIESLALLESNRISIPLILSLPASVYSLSNKDQLKVRVNTVLGSAAPPLTVKLVRAFSTVAKDSAVIQNKDLKYDQNSGHHVLDVLPDKVDVGIYVFVFEMVLHDADGEKVYATGGQIHVPIYVTGIVKVSNAEIAVLDNDLGSIETQKTLDLAGNDIVSLTANHLQKFRFSFQLTTPRGHAFKPHQAFLKLKHETKYEHIFVVGNAGKKFEIVLDFLGLVEKFYYLSGRYDIELTVGDAVMENSFLRPLGHLELDLPEAPTSKAPRLPPLAVDPYTRYGPKAEITHLFRTPEKRPPTQLSLIFLSLTLLPLIGFLVGLLRLGVNLRNFPSSAAPATYAILFHLGIAAVLVLYVLFWLKLDLFTTLKTTALLGVFLLFVGHRILSHLATTSAKLKSA* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1373 698 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 12 698 - -
Ahy16g1373 698 PANTHER RIBOPHORIN II 12 698 IPR008814 GO:0006487|GO:0008250|GO:0016021
Ahy16g1373 698 Pfam Oligosaccharyltransferase subunit Ribophorin II 15 690 IPR008814 GO:0006487|GO:0008250|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1373 Ahy-Chr16 27358413 27366838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1373 K12667 - gmx:100780415 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1373 16 27358413 27366838 Ahy6g0085 6 1156018 1163761 hybridization
Ahy16g1373 16 27358413 27366838 Ahy12g0942 12 19677371 19685104 PCT
Ahy16g1373 16 27358413 27366838 Ahy2g0812 2 15398851 15406683 PCT
Ahy12g0942 12 19677371 19685104 Ahy16g1373 16 27358413 27366838 PCT
Ahy2g0812 2 15398851 15406683 Ahy16g1373 16 27358413 27366838 PCT