Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1203 ATGGTGAGATCAGAGTTGAAAAAGCAGAGCAACAACAACCATGTGAATGTGATTGTGATTGTGTTGATCAAGCTTGCACTGTCATGCCTCTTGTTGGGTCTAGCCATCCACCTCCTCTTCTTCTTCTCTGATTCATCCCACAATGAGCTTCTCCGTGCTTCAACCAACCAAACACAAACCGCCGCTAACAATAATGTGGATGAACAAGAAGAAGAAGAAGAAGAAAAGTGTGATCTTTTTGTGGGAGATTGGGTGGCTGACCCATCTCCCCCACTCTATACTAATGAAAGCTGCCTTCTCATTGAAGATCACCAGAACTGCATGAGGAATGGACGCCCTGATTCTGAGTTCCTCTACTGGAGGTGGGCCCCACGGGCCTGTGGGCTACCCAGGTTCAGCCCAACCAAGTTCCTTCATATGATGAGGGATAAATCATGGGCTTTCATTGGTGACTCCATCTGCCGTAACCATGTTCAGTCTCTACTCTGCATTCTCTCCCAGATAGAAGCAGCCCAAGAGGTGTACCATGATGAGGAATTTAAATCAAAGATATGGAAGTTCCCTTCTTACAACTTCACACTCTCAGTAATATGGACCCCGTTCCTTATCAAAGCAGATATATTCGAAGACTCAAACGGAGTTTCGTCCTCTGAAATCCAGCTTCATCTCGACACCCTGGATCACAAATGGACCAACCAATACCACAATTTCGACTACGTCGTCATAGCCGGAGGCAAATGGTTCCTCAAGACCGCAATCTACCACGAAAACAGAACCGTCAGGGGATGCCATTATTGCCCTGGAAAGAATCTGACGGAGCTAGGATTCGACTACGCATACCGCAAGGCGTTGCGGCAGGTCTTCCATTTTCTAACAAACTCTAACCATAAAGCAACCGTTTTCTTCAGAACTACCACACCGGATCACTTTGAGAATGGAGAATGGTTCAGTGGTGGTTATTGCAATAGAACAGTACCTTTCAAAGAGGATCAAGTGAGGCTAAGTGACGTAGATTCCATCATGCGAGGGATTGAACTCCAAGAGCTTGAGAAGGCGACAGCGTGGGAACATGGCGCCAGGCTGAAACTTTTGGACACGACAAGATTGGCTTTGTTGAGGCCTGATGGACATCCAGGACCGTACAGACAGTTTCATCCCTTTGCAAATGATATGAATGCGAAAATTCAGAATGATTGTTTGCATTGGTGTTTGCCGGGACCAATTGATTCATGGAATGATATTCTACTACAAATGTTGCTCAATGCCAGATCTTAG 1275 0.4596 MVRSELKKQSNNNHVNVIVIVLIKLALSCLLLGLAIHLLFFFSDSSHNELLRASTNQTQTAANNNVDEQEEEEEEKCDLFVGDWVADPSPPLYTNESCLLIEDHQNCMRNGRPDSEFLYWRWAPRACGLPRFSPTKFLHMMRDKSWAFIGDSICRNHVQSLLCILSQIEAAQEVYHDEEFKSKIWKFPSYNFTLSVIWTPFLIKADIFEDSNGVSSSEIQLHLDTLDHKWTNQYHNFDYVVIAGGKWFLKTAIYHENRTVRGCHYCPGKNLTELGFDYAYRKALRQVFHFLTNSNHKATVFFRTTTPDHFENGEWFSGGYCNRTVPFKEDQVRLSDVDSIMRGIELQELEKATAWEHGARLKLLDTTRLALLRPDGHPGPYRQFHPFANDMNAKIQNDCLHWCLPGPIDSWNDILLQMLLNARS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1203 424 Coils Coil 52 72 - -
Ahy16g1203 424 Pfam PMR5 N terminal Domain 75 127 IPR025846 -
Ahy16g1203 424 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 129 418 IPR026057 GO:0016740
Ahy16g1203 424 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 62 419 IPR029962 GO:0016413
Ahy16g1203 424 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 62 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1203 Ahy-Chr16 21878166 21879926 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1203 - - pop:7492762 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1203 16 21878166 21879926 Ahy6g0215 6 2711228 2713531 hybridization
Ahy16g1203 16 21878166 21879926 Ahy12g0295 12 4186851 4192307 PCT
Ahy16g1203 16 21878166 21879926 Ahy2g0320 2 3672909 3678651 PCT
Ahy12g0295 12 4186851 4192307 Ahy16g1203 16 21878166 21879926 PCT
Ahy2g0320 2 3672909 3678651 Ahy16g1203 16 21878166 21879926 PCT