Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0295 ATGGTGAAGAAGATTATGAGGTCTGATCCAAAGCAATTTTCAACAATGCAAATGCAGAACAATGTTTGTGTTAAGATTGCAGTGTCATTCCTCTGTTTAGGTCTTGCTTTTCGGCTTCTATTGCCGGATTCATTCAGCTTTTCATCATCATCATCATCATCATCATCATCATCATCATCATCAATGGTGATGGAAGAAACTCCTCCTCCAATGGCAGAGGAAAAAACAGAGTCCCCTGTTTTTCATCTTCCTCTTGAAGCATCATCTGATTCTGTTGATTTTTCATCAAACAACAACAAAAGCCAAAGCTCTCAAAATGGAGCAGAAAAATGTGATCTATTTGTGGGAGAATGGGTGGCAGATAAATCTGGTCCAATGTACACAAATGAGAGTTGCAATTTGATTGAGCATCATCAAAATTGCATGAAAAATGGAAGGTCTGATTCAGGGTACCTTTATTGGAGGTGGAGTCCAAGAGGGTGTGAACTACCAAAGTTTAATCCAAGAAAGTTTCTTGATTTCATGAGAAATAAATCATTTGCTTTCATTGGTGATTCCATCTCACGCAACCATGTGCAATCCCTTCTTTGCATTCTATCTCAGGTAGAACCAGCTGTTGAGATCTACCATGACAAAGAATACAGATCAAAGATATGGAAATTCCCATCTCACAACTTCACACTCTCAGTAATATGGACTCCTTTTCTCATCAAAGCAACAATTTTTGAGGACATGGATGGAGTTTCCTCTTCAGAGACACAGCTTCATCTTGACACTCTTGACACCCTTTGGACTAAACAATATGAAACTTTTGATTTTGTTTTGATTGGTGGCGGGAAATGGTTCCTCAAGACCGCGATTTACCACGAAAACAATACAATTGTTGGATGTCATTACTGTCCTGGAAAGAACCTAACTGATTTCGGATTTGACTATGCATACAGAAAGGCGATCGGGCTAGTTTTAGACTTCTTTGTGAAATCAAGTCACAAGGCGACAATTTTCTTCAGAACGACGACACCTGATCACTTTGAGAATGGCGAGTGGTTCAGTGGAGGGTATTGTAATAGAACAGTTCCTTTCAAAGAGGGTCAAATAGAAATGATTGATGTAGATTCCACCATGAGAGGTATTGAACTTGAAGAATTCGCGAAAGCAGTATCGTCAGGATCGGATAAAGCTGCGAAATTGAAACTTCTGGACACAACTTTTCTATCATTGTTGAGACCAGATGGTCATCCAGGACCATACAGACAGTACCAACCCTTTGCCAAAGATAAGAATGCAAAAGTTCAAAATGATTGCTTACATTGGTGTTTGCCAGGACCAATTGATTCTTGGAATGACATAATAATGGAAATGTTAGTGAATCCTTAA 1377 0.3907 MVKKIMRSDPKQFSTMQMQNNVCVKIAVSFLCLGLAFRLLLPDSFSFSSSSSSSSSSSSSSMVMEETPPPMAEEKTESPVFHLPLEASSDSVDFSSNNNKSQSSQNGAEKCDLFVGEWVADKSGPMYTNESCNLIEHHQNCMKNGRSDSGYLYWRWSPRGCELPKFNPRKFLDFMRNKSFAFIGDSISRNHVQSLLCILSQVEPAVEIYHDKEYRSKIWKFPSHNFTLSVIWTPFLIKATIFEDMDGVSSSETQLHLDTLDTLWTKQYETFDFVLIGGGKWFLKTAIYHENNTIVGCHYCPGKNLTDFGFDYAYRKAIGLVLDFFVKSSHKATIFFRTTTPDHFENGEWFSGGYCNRTVPFKEGQIEMIDVDSTMRGIELEEFAKAVSSGSDKAAKLKLLDTTFLSLLRPDGHPGPYRQYQPFAKDKNAKVQNDCLHWCLPGPIDSWNDIIMEMLVNP* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0295 458 MobiDBLite consensus disorder prediction 49 65 - -
Ahy12g0295 458 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 163 454 IPR026057 GO:0016740
Ahy12g0295 458 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 26 56 456 - -
Ahy12g0295 458 MobiDBLite consensus disorder prediction 49 77 - -
Ahy12g0295 458 Pfam PMR5 N terminal Domain 109 162 IPR025846 -
Ahy12g0295 458 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 56 456 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0295 Ahy-Chr12 4186851 4192307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0295 - - gmx:100305942 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0295 12 4186851 4192307 Ahy12g0295 12 4186851 4192307 ECH
Ahy12g0295 12 4186851 4192307 Ahy2g0320 2 3672909 3678651 hybridization
Ahy16g1203 16 21878166 21879926 Ahy12g0295 12 4186851 4192307 PCT
Ahy6g0215 6 2711228 2713531 Ahy12g0295 12 4186851 4192307 PCT
Ahy12g0295 12 4186851 4192307 Ahy16g1203 16 21878166 21879926 PCT
Ahy12g0295 12 4186851 4192307 Ahy6g0215 6 2711228 2713531 PCT