Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1201 ATGTTGGAGAAAGTGGAAGAGTTCAACATGGAGAAGGTGATCCAAGAGTTTGAGACACTTACAAAAGATGCCGGAAGGGTTCAGAGGGAAACCCTCAAGAGGATTCTGGAGGATAATGCTTCAGCTGAGTATTTGCAAAATTTGGGTCTCAACGGAAGAACTGACCCTGAAAGTTTCAAGGCTTGTGTACCACTTGTTACCCACAAAGAATTGGAGCCTTATATACATAGAATCATTGATGGAGACACTTCTTCTATTCTCACTGGAAAACCTATCACTACTATGTCATTAAGCTCTGGCACTACTCAGGGGAAGCCAAAATATCTGCCATGGAATGATGAATTGTTTGAAACCACTATGCAGATATATCAGACCTCTTTTGCCTATAGGAATAGAGAGTTCCCTATCAAGAATGGGAAGGCTTTGAGCTTCATATACAGCAGCAAACAGTTCAAAACAAAAGGGGGTGTGGCAGCCGGAACTGCCACAACCAATGTGTTTCGCAATTCGCGGTACAAGCGGGAGATGAAGGCACTCCAATCCCAATGTTGCAGCCCAGATGAAGTGATATTCGGCCCTGACTTCTTTCAATCACTCTACTGCCACCTCTTATGTGGACTAATCTTCCATGAAGAAGTTCAGCTTGTTTCGTCCGTATTTGCACACAGCATTGTCCATGCTTTTAGAACATTCGAACAGGTATGGGAAGAGCTTTGCACTGATATCAAACAAGGTGTCCTCAGCAGCCGGATCACCGTTCCATCGATCCGAGCAGTCATGTCCAAGCTCCTAAAACCGAACCCAGAGCTTGCCAACCTGATCCATGCAAAATGTGTGGGATTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTTCCTAATGCAAAGTATGTGTACGGAATAATGACAGGGTCAATGGAGCCATATTTGAAAAAGATGAGGCATTATGCTGGGGAGCTGCCATTGTTGACCGCTGACTATGGATCCTCTGAAGGGTGGATTGCTGCAAATGTGAACCCAAGACTTGCACCTGAATTTGCTACTTATGCTGTGCTTCCTCAAATTGGTTACTTTGAATTCATTCCACTCACACAGCTTGAAAATAATGATGCTTCTTCTTCATTCCTCTCTATTGATCTCAACCCAGTGGGCCTCACTGAGGTCAAGGTTGGTGAGGAGTACGAAATTGTCATCACCAATCCAGCAGGTTTATACAGGTATAGGCTAGGGGACGTTGTGAAGGTTATGGGATTCCATAACTCAAGTCCAGAACTGAAATTCGTTCGTCGGAGCAGTCTTCTTCTTACCATCAACATTGACAAGAACACCGAGGCGGATTTGCAGTTGGCGGTGGAAGCGGCGGGGAAAGTGTTGGCAGAGGAGAAACTAGAAGTAGTTGACTTCACCAGCCATGTTGACTTGTCAAAGGAGCCAGGGCATTATGTTATATTCTGGGAAATCAATGGAGAAGCTAGTGAACAAGTTCTTGGTGAATGCTGCAACTGTTTGGACAGGTCCTTTGTTGATGCAGGGTACACTAGCTCCCGCAAGGTCAACTGCATTGGGCCCCTCGAACTCCGACTTGTTAGGAGGGGAACATTCCAGAAGATTCTAGAACATTACCTTGGACTTGGAGCTACTGTTAGTCAGTATAAGACTCCAAGATGTGTAGGCCCTACAAACCCCACTGTCTTGCAAATCTTGACTGATAATGTTGTCAAAACCTATCTCAGTACTGCTTTCAATTGA 1749 0.4494 MLEKVEEFNMEKVIQEFETLTKDAGRVQRETLKRILEDNASAEYLQNLGLNGRTDPESFKACVPLVTHKELEPYIHRIIDGDTSSILTGKPITTMSLSSGTTQGKPKYLPWNDELFETTMQIYQTSFAYRNREFPIKNGKALSFIYSSKQFKTKGGVAAGTATTNVFRNSRYKREMKALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFHEEVQLVSSVFAHSIVHAFRTFEQVWEELCTDIKQGVLSSRITVPSIRAVMSKLLKPNPELANLIHAKCVGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKMRHYAGELPLLTADYGSSEGWIAANVNPRLAPEFATYAVLPQIGYFEFIPLTQLENNDASSSFLSIDLNPVGLTEVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSSPELKFVRRSSLLLTINIDKNTEADLQLAVEAAGKVLAEEKLEVVDFTSHVDLSKEPGHYVIFWEINGEASEQVLGECCNCLDRSFVDAGYTSSRKVNCIGPLELRLVRRGTFQKILEHYLGLGATVSQYKTPRCVGPTNPTVLQILTDNVVKTYLSTAFN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1201 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 582 IPR004993 -
Ahy16g1201 582 Coils Coil 10 30 - -
Ahy16g1201 582 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 582 - -
Ahy16g1201 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1201 Ahy-Chr16 21840330 21844271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g1201 14 579 EF-hand Containing Proteins AT1G23160 38.038 1.32e-137 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1201 K14506 - gmx:100794598 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1201 16 21840330 21844271 Ahy6g0217 6 2739985 2743827 hybridization
Ahy16g1201 16 21840330 21844271 Ahy12g0291 12 4140189 4146194 PCT
Ahy16g1201 16 21840330 21844271 Ahy2g0315 2 3626846 3632506 PCT
Ahy12g0291 12 4140189 4146194 Ahy16g1201 16 21840330 21844271 PCT
Ahy2g0315 2 3626846 3632506 Ahy16g1201 16 21840330 21844271 PCT