Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0291 ATGTTAGAGAAAGTTGAAGGTTTCAACATGGAGAAAGTAATAGAGGAATTTGAGGAAGTTACTAAGGATGCTGGTAGAGTTCAAATTGAAACTCTTAGGAAGATTCTTGAAGATAATTCAGAAGCTGAATACCTTCAGAATTTAGGACTTAATGGAAGAACTGATCCTCAGAGTTTCAAGAACTGTGTCCCACTTGTTACTCATAAAGAGCTTGAACCTTACATCAATAGAATGATTGATGGTGATCTTTCTTCAATCCTCACTTCAAAACCAATCACAACTATGTCTCTAAGCTCTGGAACTACTCAGGGGAAGCCAAAGTTTGTGCCATGGAATGATGAGCTTTTTGAGACCACAGTTCAGATATATAAAACCTCTTTTGCCTTTAGAAACAAAGAATTTCCAATCACAAGTGGAAAGGCCTTAAGCTTCATATACAGCAGCAAGCAATTCAAGACCAAAGGAGGGTTAGCAGCAGGAACAGCAACAACAAATGTTTTCAGAAATTCAAGATACACTGTTGCAATGCAAGCACTAAAATCACAATGTTGCAGCCCTGAAGAAGTGATATTTGGTCCTGATTTTCACCAATCACTCTATTGCCACCTACTTTGTGGCCTAATCTTCTGTGATGAGGTTCAATTTGTGTCCTCAACTTTTGCACACAGCATTGTCCATTCTTTTAGGACATTTGAGCAAGTTTGGGAGGATCTTGTTGCTGATATAAGGGATGGTGTCCTTACCGAAAGGGTCACTGTCCCTTCCTTGAGGAATGCTATGTCCAAAATTCTCAAGCCTGATCCCAATTTGGCTAACATCATCCAAACAAAAATCATGGGGTTAAGCAATTGGTATGGATTAATTCAAGAGCTATTTCCAAATGCAAAGTATGTGTATGGAATAATGACAGGGTCAATGGAGCCATATTTGAAGAAGTTAAGGCACTATGCTGGTGACCTACCACTGTTGACTTCTGATTATGGATCTTCAGAAGGTTGGATTGCTACAAATGTGAATCCAACATTGCCACCTGAGTCTGCCTTGTACACTGTTCTTCCTCAAATTGGATACTTTGAATTTATACCTCAAAATAAGGCAGACTCTGATTTCATTGATGTGGAACCTCAGCCTGTTGGACTCACTCAAGTTAAGGTTGGTCAAGAATATGAAATTGTTATCACCACTCCAGCAGGCTTGTACAGGTATCGACTCGGCGATATTGTTAAGGTTATGGGATTCTACAACTCATCGCCGCAACTAAAATTCGTCCGGCGGAGCAGCCTTCTACTTACAATCAACATAGACAAGAACACAGAGAAGGATCTTCAATTAGCTGTGGAAGAAGCATCAAAGTTTCTAGCTGAAGAAAAATTAGAAGTTGTTGATTACACAAGTTATGTTGATGTGTCCAAAGATCCAGGGCACTATGTTATAGTTTGGGAAATTAGTGGCGAAGCAAGTGAAGAAGTTCTTAGTGAATGTTGCAATTGCTTGGACAAATCCTTTGTTGATGCAGGGTATACTAGCTCTAGGAAGGTCAATTGCATCGGCGCCCTCGAACTCCGAGTCGTCCGGCACGGAACATTCCAGAAGATTCTAGAACATTATATAGGGTTAGGATCTGCTGTTAGTCAGTTCAAGACACCAAGGTGTGTAGGGTCTAACAATGCCAAAGTGTTGCAAATATTGAATGAGAATGTTGTGAACAAGTACTTTAGTTCTGCTTTCAATAATTGA 1737 0.399 MLEKVEGFNMEKVIEEFEEVTKDAGRVQIETLRKILEDNSEAEYLQNLGLNGRTDPQSFKNCVPLVTHKELEPYINRMIDGDLSSILTSKPITTMSLSSGTTQGKPKFVPWNDELFETTVQIYKTSFAFRNKEFPITSGKALSFIYSSKQFKTKGGLAAGTATTNVFRNSRYTVAMQALKSQCCSPEEVIFGPDFHQSLYCHLLCGLIFCDEVQFVSSTFAHSIVHSFRTFEQVWEDLVADIRDGVLTERVTVPSLRNAMSKILKPDPNLANIIQTKIMGLSNWYGLIQELFPNAKYVYGIMTGSMEPYLKKLRHYAGDLPLLTSDYGSSEGWIATNVNPTLPPESALYTVLPQIGYFEFIPQNKADSDFIDVEPQPVGLTQVKVGQEYEIVITTPAGLYRYRLGDIVKVMGFYNSSPQLKFVRRSSLLLTINIDKNTEKDLQLAVEEASKFLAEEKLEVVDYTSYVDVSKDPGHYVIVWEISGEASEEVLSECCNCLDKSFVDAGYTSSRKVNCIGALELRVVRHGTFQKILEHYIGLGSAVSQFKTPRCVGSNNAKVLQILNENVVNKYFSSAFNN* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0291 578 Pfam GH3 auxin-responsive promoter 16 554 IPR004993 -
Ahy12g0291 578 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 577 IPR004993 -
Ahy12g0291 578 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0291 Ahy-Chr12 4140189 4146194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0291 17 574 EF-hand Containing Proteins AT1G23160 37.871 3.27e-134 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0291 K14506 - gmx:100813492 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0291 12 4140189 4146194 Ahy12g0291 12 4140189 4146194 ECH
Ahy12g0291 12 4140189 4146194 Ahy2g0315 2 3626846 3632506 hybridization
Ahy16g1201 16 21840330 21844271 Ahy12g0291 12 4140189 4146194 PCT
Ahy6g0217 6 2739985 2743827 Ahy12g0291 12 4140189 4146194 PCT
Ahy12g0291 12 4140189 4146194 Ahy16g1201 16 21840330 21844271 PCT
Ahy12g0291 12 4140189 4146194 Ahy6g0217 6 2739985 2743827 PCT