Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1182 ATGACCATGGCACTCGTTATCCATTCCTCCGAAATGTTCATTGCCCCCAAATTTCCGTGTAATCCGAATCCAAACCCTATCAAATTCCACAGCTTTAAGCCCGTGGCAGTTAGGTCAAGTGCAAGAGGATTAAAAGCTTGTTGTGAAGTGAAGGATTGTGCGGTTTTGGAATTGGAACAGAATTTGAGGTTGTACGGTGAGTTCTCGGGTGCTGTGAAGTTGGGGAGGAAAGAAGAAGAGGAGGAAAAGCAGAAGTACTACGTGAATATGGGATATGCCATCCGAACTCTGAGGGAAGATTTTCCCCAAATCTTCTTCAAGGAACCTAGCTTCGATGTCTACAGGGATGATATTGTATTTAAAGATCCTTTGAATACCTTTGTTGGCATCCAGAAATACAAATCGCTGTTGTGGGCATTACGATTTCATGGCAGAATATTTTTCCGAGCTTTGTCGATTGACGTAATCAGTGTGTGGCAGCCTGTTGAGAATGTGATCATGGTTCGGTGGAGTGTTCACGGGATTCTGCGAATTCCATGGGAGAGTCGTGGTAGGTTTGATGGGACCTCTGAGTACAAACTTGACAGGAAAGGCAAGATTTATGAGCACCGGGTTGACAACATTGCTCCAAATACACCTCATCATAAATTTAGAGTGCTAAGAGTGGAAGAATTGATTCAATCCATTGGCTGCCCCTCAACCCCAAAACCAACTTATTTTGAAACATCGTCATCTACAAATAGAACTTGA 750 0.4333 MTMALVIHSSEMFIAPKFPCNPNPNPIKFHSFKPVAVRSSARGLKACCEVKDCAVLELEQNLRLYGEFSGAVKLGRKEEEEEKQKYYVNMGYAIRTLREDFPQIFFKEPSFDVYRDDIVFKDPLNTFVGIQKYKSLLWALRFHGRIFFRALSIDVISVWQPVENVIMVRWSVHGILRIPWESRGRFDGTSEYKLDRKGKIYEHRVDNIAPNTPHHKFRVLRVEELIQSIGCPSTPKPTYFETSSSTNRT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1182 249 SUPERFAMILY NTF2-like 111 205 IPR032710 -
Ahy16g1182 249 PANTHER - 39 248 - -
Ahy16g1182 249 Pfam Uncharacterized conserved protein (DUF2358) 93 203 IPR018790 -
Ahy16g1182 249 PANTHER RIKEN CDNA 2310061I04 GENE 39 248 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1182 Ahy-Chr16 21477149 21479181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1182 - - gmx:100792423 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1182 16 21477149 21479181 Ahy6g0235 6 2896314 2898195 hybridization
Ahy16g1182 16 21477149 21479181 Ahy12g0199 12 3174561 3176793 PCT
Ahy16g1182 16 21477149 21479181 Ahy2g0230 2 2579244 2581472 PCT
Ahy12g0199 12 3174561 3176793 Ahy16g1182 16 21477149 21479181 PCT
Ahy2g0230 2 2579244 2581472 Ahy16g1182 16 21477149 21479181 PCT