Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0199 ATGGCCGTTCTAATACACTACCCGGAAATGTCAATTGCCCCCCAAATTGTCAAAAACCCTAACCCTAATCTGAGCAAGCTCTACAGCTTCAGACCCTACACTAAGAAGGGTACTCTTAAGGCAATTGGGTCGAATCGTGAGCTGAAAATCTCTTGCAAAGTGAAGGAATTGGGCGTTTTGAATGTGGGTTTAGATCAGAATGTTAAGAAAAGTTCGAGACAGAGCAAAGAGGAGGAAGAGAAGCAGAATTACTATGTAAATTTGGGATACGCAATCCGAACCTTGAGGGAAGAATTCCCTGATTTGTTCTACAAGGAACTCAGCTTTGACATCTACAGGGATGATATTGTATTCAAAGATCCGCTGAATACTTTCATGGGCATTGAGAATTACAAATCGATTTTCTGGGCGCTACGCTTTCATGGCAGGATTTTCTTCAAAGCTCTGTGGATCGACATAAGTACCGTGTGGCAGCCTGTTGAGGACATCATTATGGTTCGCTGGACAGTTCATGGGATCCCACGAGTCCCATGGGAGAGTCGAGGTAGGTTTGATGGAACCTCTGTGTACAAACTTGACAAACAAGGCAAGATATACGAGCACCGTGTCGACAACATTGCTTTGAATTCACCTCCCAAGTTTAAAGTTCTTAGTGTGGAAGAACTAATTCGATCTATTGGGTGTCCCTCAACCCCAAAACCAACTTACTTTGAAGTATCTTCAACTACTGAGAGAACATGA 741 0.4318 MAVLIHYPEMSIAPQIVKNPNPNLSKLYSFRPYTKKGTLKAIGSNRELKISCKVKELGVLNVGLDQNVKKSSRQSKEEEEKQNYYVNLGYAIRTLREEFPDLFYKELSFDIYRDDIVFKDPLNTFMGIENYKSIFWALRFHGRIFFKALWIDISTVWQPVEDIIMVRWTVHGIPRVPWESRGRFDGTSVYKLDKQGKIYEHRVDNIALNSPPKFKVLSVEELIRSIGCPSTPKPTYFEVSSTTERT* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0199 246 Gene3D - 108 205 - -
Ahy12g0199 246 PANTHER - 66 245 - -
Ahy12g0199 246 Pfam Uncharacterized conserved protein (DUF2358) 91 201 IPR018790 -
Ahy12g0199 246 SUPERFAMILY NTF2-like 109 203 IPR032710 -
Ahy12g0199 246 PANTHER RIKEN CDNA 2310061I04 GENE 66 245 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0199 Ahy-Chr12 3174561 3176793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0199 - - gmx:100792423 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0199 12 3174561 3176793 Ahy12g0199 12 3174561 3176793 ECH
Ahy12g0199 12 3174561 3176793 Ahy2g0230 2 2579244 2581472 hybridization
Ahy16g1182 16 21477149 21479181 Ahy12g0199 12 3174561 3176793 PCT
Ahy6g0235 6 2896314 2898195 Ahy12g0199 12 3174561 3176793 PCT
Ahy12g0199 12 3174561 3176793 Ahy16g1182 16 21477149 21479181 PCT
Ahy12g0199 12 3174561 3176793 Ahy6g0235 6 2896314 2898195 PCT