Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0584 ATGGGAGTTGTAACTGTTGGTGAATTGAAGCCTAGTATTTCTCAAGGGAAAAGGACCTTTCGTCCAAGTTCAAGCATAAGACATGCCAATGAATGGCCAATATCTGAAGTCTCTAGTGATCTTACTATTGAAGTAGGAGACTCAAGCTTTCCACTTCACAAGTTTCCTCTAGTTTCTAGGAGTGGAAGAATCAGAAAACTGCTGCTAGAAGCAAAAGATTCCAAGGTTTCACGCATAAGTCTCCAAAATGTGCCTGGTGGTATAGATGCATTTGAGCTAGCAGCTAAATTCTGCTATGGAATAAATGTTGAATTCACTCTCTCAAACGTTGCCAAGCTACGTTGCATAGCGCATTTTCTAGAAATGACTGAAGAATTTGCTGAGAAGAACTTGGAGACTAGAGCGGAATCATATCTAAAAGAGTCAGTGCTACCAAGCATACAAAACAGCATTAGTGTTCTTCACCATTGTGAGACTCTTCTCCCAATTTCAGAAGACATTAACCTTGTTAGCAGGTTAATCAATTCAGTTGCAAACAATGCATGCAAACAACAACTTACCTCTGGATTGCTAAAACTTGATCATACTTTAAATTCTAAGACAATTTCAAACATGGAACCAGAAACTCCCTCGGATTGGTGGGGGAAATCTTTCAATGTTCTTGGCCTTGATTTTTTCCAGAGAGTAATTTCTGTGTTGAAATCAAAGGGGCTAAAACAAGATATGATCAGTAAGATTTTGATAAACTATGCACATAGTTCACTACAGGGGATTGCTCTTATTAGGGATCCTCAAGTTGTTAAAGGGAGTTTACCTGACTTGGAAGTAAAGAAAAAACAAAGGCTGGTCGTTGAAGCCATAGTTGGATTACTCCCTAATCAATCAAGGAAGAGCCAGGTTCCAATGGCATTCTTATCATTCCTGTTGAAGGCTGCTATCGCGGCTGGGGCCCCAACTTCTTGCAGGTGTGATTTGGAGAGGCGAATCGGCCTACAACTCGACCAGGCAATCCTAGAAGACATACTAATTCCGGCTAACTCGCTTCAGAACACACACAGCACAATATATGACACAGATTCAATCTTGAGGATTTTCTCAGTTTTCCTTAACCTTGATGAGGAGGACGATGATGATGATAATGATGGTGGCTGCTTCAGAGATGAAAGCCAAATGGTGTATGACTTCGACAGCCCCGGATCTCCAAAACAAAGCTCAATCCTCAAGGTATCTAAACTGATGGACAACTATCTTGCTGAAGTAGCATTAGACTCAAACTTGTTACCATCAAAATTCACAGCACTTGCAGAACTACTCCCAGATCATGCACGCATAGTGAGTGATGGACTCTACAGAGCAGTTGATATCTTCCTTAAGGTTCATCCAAATATAAAGGATTCAGAGAGGTACCGGTTATGCAAAAGCATAGATTGCCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAGAACGAGAGGCTGCCGGTGCAAATGGCGGTTCAAGTGCTTTACTTCGAGCAAATGAGACTGCGAAACGCGATGAACGGCGGAGGACACCACCACAGCAACAGCTTCTTGTTCGGCGGCCATTTCCCTCAGCGGACGGGAAGCGGTGCCGGAAGCGGCGCCATTTCGCCGAGGGATAACTACGCGTCGGTTCGACGGGAGAATCGAGAGCTGAAGCTGGAGGTAGCGAGAATGAGGATGAGGCTGACTGATTTGGAGAAAGACCATGTTTCCATGAAACAGGAGCTTGTGAAGTCACAATACCCCGCTAACAAGCTTTTCAAATCTTTCACGAAGAAACTAAGCAAACTCAATTCTCTCTTTCGTTTAAGCACTAGTACTTTTAAGCAATCATCATTTGGTGCCAGTAATAATAATGCCAAAGGTATCGCTCATTCAGAAACTCATCGCTTTCCTTTTCCAAAAAGAAGACGCCACTCAGTTTCATGA 1956 0.43 MGVVTVGELKPSISQGKRTFRPSSSIRHANEWPISEVSSDLTIEVGDSSFPLHKFPLVSRSGRIRKLLLEAKDSKVSRISLQNVPGGIDAFELAAKFCYGINVEFTLSNVAKLRCIAHFLEMTEEFAEKNLETRAESYLKESVLPSIQNSISVLHHCETLLPISEDINLVSRLINSVANNACKQQLTSGLLKLDHTLNSKTISNMEPETPSDWWGKSFNVLGLDFFQRVISVLKSKGLKQDMISKILINYAHSSLQGIALIRDPQVVKGSLPDLEVKKKQRLVVEAIVGLLPNQSRKSQVPMAFLSFLLKAAIAAGAPTSCRCDLERRIGLQLDQAILEDILIPANSLQNTHSTIYDTDSILRIFSVFLNLDEEDDDDDNDGGCFRDESQMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDSNLLPSKFTALAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKSIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQMRLRNAMNGGGHHHSNSFLFGGHFPQRTGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSQYPANKLFKSFTKKLSKLNSLFRLSTSTFKQSSFGASNNNAKGIAHSETHRFPFPKRRRHSVS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0584 651 ProSiteProfiles BTB domain profile. 39 107 IPR000210 GO:0005515
Ahy16g0584 651 Pfam BTB/POZ domain 37 141 IPR000210 GO:0005515
Ahy16g0584 651 Coils Coil 550 584 - -
Ahy16g0584 651 SUPERFAMILY POZ domain 22 124 IPR011333 -
Ahy16g0584 651 ProSiteProfiles NPH3 domain profile. 212 509 IPR027356 -
Ahy16g0584 651 SMART BTB_4 39 131 IPR000210 GO:0005515
Ahy16g0584 651 PANTHER OS12G0117600 PROTEIN 26 614 IPR043454 -
Ahy16g0584 651 Gene3D Potassium Channel Kv1.1; Chain A 21 146 IPR011333 -
Ahy16g0584 651 Pfam NPH3 family 212 485 IPR027356 -
Ahy16g0584 651 MobiDBLite consensus disorder prediction 621 651 - -
Ahy16g0584 651 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 26 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0584 Ahy-Chr16 11065700 11069438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g0584 1 459 EF-hand Containing Proteins AT2G47860 58.642 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0584 - - ahf:112695833 1237.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0584 16 11065700 11069438 Ahy16g0584 16 11065700 11069438 ECH
Ahy16g0584 16 11065700 11069438 Ahy6g0713 6 8714532 8718313 hybridization
Ahy16g0584 16 11065700 11069438 Ahy12g2585 12 115260436 115264376 PCT
Ahy16g0584 16 11065700 11069438 Ahy2g2240 2 98428624 98432489 PCT
Ahy12g2585 12 115260436 115264376 Ahy16g0584 16 11065700 11069438 PCT
Ahy2g2240 2 98428624 98432489 Ahy16g0584 16 11065700 11069438 PCT