Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2585 ATGGGAGTGGTAACAGTTGGTGAATTGAAGCCTAGCATTTCAGGAAAAAGAACCTTCCGTCCAAGTTCAAGCATAAGGCATGCCACTGAATGGCCAATTTCTGATGTATCTAGTGATTTTACAATTGAAGTTGGATCTTCAAGCTTTGCACTTCACAAGTTTCCTCTGGTTTCTAAGAGTGGAAGAATAAGGAAACTGCTGTTAGAGGCTAAAGACTCGAAGGTTTCGCGCATAAGTCTGGCGAACGTGCCGGGCGGCCTAGAATCGTTCGAGCTAGCTGCGAAATTCTGCTATGGAATCAATCTTGAATTAACACTCTCCAATGTTGCTATTCTAAAATGTGTATCACACTTTCTTGAAATGACAGAGGAGTATGCAGAGAAGAACTTGGAAACAAGAGTTGAATCATATCTAAAGGATACCGTTCTACCTAACACATCAAGCACCATAACCGTGCTTCATCGCTGCGAAACTCTTCTTCCATACTCAGAAGAGATCAACCTTGTTAGCAGGCTAATCAACGCGATTGCGAATAATGCATGTAAAGAACAGCTTACCTCTGGATTGTTGAAATTGGATCATAACTTCCCTTCCAAGACTATTTCTAGCATGGAACCGGAGACGCCGTCGGATTGGTGGGGGAAGTCTCTCAATATTCTTAGCCTTGAATTCTTCCAGAGAGTTCTGACGGCCGTGAAGTCGAAGGGACTAAAACAAGAAATGATCAGCAAGATCTTGATAAATTACGCGCACAATTCGCTTCAGGGGATTGTTAGTATTAGCAAGGATCCTCAATTTTTCAAGGGAAGTTCATCTGACTTGGAGTTGCAAAAGAGACAGAGGATAATTGTGGAAGCCATTGTTAGCTTGCTGCCTACGCAATCAAGGAAAAGTCCCGTTCCAATGGCGTTTCTATCCAGTTTGTTGAAGGCTGCAATTGCTGTGTTCGCTTCTTCGTCGTGCAGATCCGATCTGGAGAGAAGGATTGGCCTACAGCTTGATCAGGCAATCCTTGAAGACATACTAATTCCGACAAATTCGCAGCAAAATTTGCAGAACACAGCAATAATGTATGACATAGATTCAATTGTGAGGATATTTTCCATTTTCTTGAACTTGGATGAGGAGGAGGAGGATGATAATCGAATGCGAGACGAAAGCGAAATGGTTTATGACTATGACAGTCCTGGATCTCCAAAACAAAGCTCAATTATTAAGGTCTCAAAATTGCTGGACAATTTTCTAACCGAAGTAGCACTCGATCCAAACTTGTCACCATCCAAGTTTATATCGCTTGCAGAGCTACTTCCAGATCACGCCAGAGTAGTTAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGATCGATACCGTCTTTGCAAGGCCATTGATTGTCAGAAACTGACTCAAGAAGCATGCAGCCATGCAGCGCAAAACGAAAGGCTGCCGGTACAAATGGCGGTTCAAGTTCTTTACTTCGAGCAAATCCGGCTGCGAAACGCAATGAACGGAGGACACAACCAGATCTTCTTCGGCGGAGGATTCAACGGCCAGTTCCCTCAACGCTCGGGGAGCGGAGCAGGAAGCGGAGCCATTTCTCCGCGAGACAACTACGCTTCGGTGCGAAGAGAGAACCGGGAGCTGAAGCTGGAGGTTGCGAGAATGCGAATGAGGCTAACTGATTTGGAGAAAGATCACGTTTCAATGAAGCAGGGGCTTGTAAAGACACGCTCTGCAAGCAGGCTATTCAAATCATTGTCAAGAAAACTTAGCAAAATTAATATTCTATTTAGGATATCTAGCATTAAGCCAAATGGTGCTAGTTCAGAAAGCAGATTCCCTTTCCCTAGGAGAAGGCGTCACTCAGTTTCATGA 1905 0.4394 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDFTIEVGSSSFALHKFPLVSKSGRIRKLLLEAKDSKVSRISLANVPGGLESFELAAKFCYGINLELTLSNVAILKCVSHFLEMTEEYAEKNLETRVESYLKDTVLPNTSSTITVLHRCETLLPYSEEINLVSRLINAIANNACKEQLTSGLLKLDHNFPSKTISSMEPETPSDWWGKSLNILSLEFFQRVLTAVKSKGLKQEMISKILINYAHNSLQGIVSISKDPQFFKGSSSDLELQKRQRIIVEAIVSLLPTQSRKSPVPMAFLSSLLKAAIAVFASSSCRSDLERRIGLQLDQAILEDILIPTNSQQNLQNTAIMYDIDSIVRIFSIFLNLDEEEEDDNRMRDESEMVYDYDSPGSPKQSSIIKVSKLLDNFLTEVALDPNLSPSKFISLAELLPDHARVVSDGLYRAVDIFLKVHPNIKDSDRYRLCKAIDCQKLTQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQIFFGGGFNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQGLVKTRSASRLFKSLSRKLSKINILFRISSIKPNGASSESRFPFPRRRRHSVS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2585 634 ProSiteProfiles NPH3 domain profile. 211 507 IPR027356 -
Ahy12g2585 634 Gene3D Potassium Channel Kv1.1; Chain A 24 146 IPR011333 -
Ahy12g2585 634 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 627 - -
Ahy12g2585 634 SUPERFAMILY POZ domain 22 123 IPR011333 -
Ahy12g2585 634 Coils Coil 548 575 - -
Ahy12g2585 634 PANTHER OS12G0117600 PROTEIN 25 627 IPR043454 -
Ahy12g2585 634 Pfam NPH3 family 211 483 IPR027356 -
Ahy12g2585 634 MobiDBLite consensus disorder prediction 615 634 - -
Ahy12g2585 634 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2585 Ahy-Chr12 115260436 115264376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g2585 1 457 EF-hand Containing Proteins AT2G47860 59.509 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2585 - - gmx:100814622 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2585 12 115260436 115264376 Ahy12g2585 12 115260436 115264376 ECH
Ahy12g2585 12 115260436 115264376 Ahy2g2240 2 98428624 98432489 hybridization
Ahy16g0584 16 11065700 11069438 Ahy12g2585 12 115260436 115264376 PCT
Ahy6g0713 6 8714532 8718313 Ahy12g2585 12 115260436 115264376 PCT
Ahy12g2585 12 115260436 115264376 Ahy16g0584 16 11065700 11069438 PCT
Ahy12g2585 12 115260436 115264376 Ahy6g0713 6 8714532 8718313 PCT