Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0397 ATGTTGAATGAGCAATTTGCTTCCACAAGCCATGCAGCAAGAACAACAACACAACATGGACATGGTGGTGGTGATGATGATCAAGAAGAAGAAGAACACACCATAAGAGAAATTCATGCCTTAACACCACCTAGACCCCCAACAACAACAAACCATGGGAATAGGAGAAGAGAAGCTTGGGAAACTCATCACAGCCACCGTTCATCTTCTTTGTCCATGGCAAGCACAGATGGTGGTTCAAGTGAGAACTTCACAAGCATGAGTAGGGAGTTCAGTGCTCTTGTTCTTGCAGGTTCAACTATTGATCATAACAACATCAACACTACTAGCAGCTCCATGATCATGAACACTGGCCATGACAACACTGAAATTATTGGAGGAGGAAACAACAATACCAGCAGCAACAACAACAACAATAACTTGTTGGGGAGGATTAGAGAAGAGGACATGATGGAAGAGACTAACCCTTTGGCTATTGTTCCAGATAACCATCCATTGGATCCTCTTCCATCACCAAGAGGAATGACTAGTGGTGGTGCAGGTTCTAGTAGTGGTCATCATCAACATCAACATCATCATCATCAAGTAGTTGAAGAGGTTTCAGTGCAAAGGGTGAAGAAGGAGGAGGTTGATGCAAAGATATCAGCATGGCAGAACAACAAGATAGCAAAGATTAACAACAGATTCAAGAGAGAAGATGCTGTCATCAAAGGCTGGGAGAGTGAGCAGGTTCAGAAGGCTACTTCTTGGATGAAGAAAGTTGAGAGGAAGCTGGAAGAGAAAAGAGCAAAAGCAATGGAGAAAATGCAAAATGAGGTAGCAAAGGCTCATAGGAAAGCAGAGGAGAGAAGGGCATCAGCAGAGGCTAAAAGAGGAACCAAAGTTGCAAGGGTTCTTGAGATTGCTTCCCTCATGAGAGCTGTTGGAAGACCCCCTTCCAAAAAATCCTTCTTCAAAAGTTAA 963 0.4341 MLNEQFASTSHAARTTTQHGHGGGDDDQEEEEHTIREIHALTPPRPPTTTNHGNRRREAWETHHSHRSSSLSMASTDGGSSENFTSMSREFSALVLAGSTIDHNNINTTSSSMIMNTGHDNTEIIGGGNNNTSSNNNNNNLLGRIREEDMMEETNPLAIVPDNHPLDPLPSPRGMTSGGAGSSSGHHQHQHHHHQVVEEVSVQRVKKEEVDAKISAWQNNKIAKINNRFKREDAVIKGWESEQVQKATSWMKKVERKLEEKRAKAMEKMQNEVAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFFKS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0397 320 PANTHER OS02G0116800 PROTEIN 25 317 - -
Ahy16g0397 320 Coils Coil 251 290 - -
Ahy16g0397 320 MobiDBLite consensus disorder prediction 1 84 - -
Ahy16g0397 320 Pfam Remorin, C-terminal region 209 314 IPR005516 -
Ahy16g0397 320 MobiDBLite consensus disorder prediction 51 65 - -
Ahy16g0397 320 MobiDBLite consensus disorder prediction 265 292 - -
Ahy16g0397 320 MobiDBLite consensus disorder prediction 66 84 - -
Ahy16g0397 320 MobiDBLite consensus disorder prediction 1 17 - -
Ahy16g0397 320 MobiDBLite consensus disorder prediction 20 39 - -
Ahy16g0397 320 PANTHER CARBOXY-TERMINAL REGION REMORIN 25 317 - -
Ahy16g0397 320 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0397 Ahy-Chr16 7741457 7744689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0397 - - adu:107492944 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0397 16 7741457 7744689 Ahy16g0397 16 7741457 7744689 ECH
Ahy16g0397 16 7741457 7744689 Ahy6g0927 6 12005078 12008332 hybridization
Ahy16g0397 16 7741457 7744689 Ahy12g1583 12 85384125 85387869 PCT
Ahy16g0397 16 7741457 7744689 Ahy2g1343 2 69974784 69978105 PCT
Ahy12g1583 12 85384125 85387869 Ahy16g0397 16 7741457 7744689 PCT
Ahy2g1343 2 69974784 69978105 Ahy16g0397 16 7741457 7744689 PCT