Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g1583 ATGTTGAATGATCAAAGCACATCAACACTATCATCGACAAGAAGAAACCATGGCAGAGAGGAGCAAAATAACAACAATATTAATGATCAAGGAGAAGATGACCAATATATCAGAGAAATTCATGCTTTAACCCCTCCTCTAACCACCACTACGGCCACCATGACCGCTAACCTTCGCCGTAGAATAAGAGAAGCTTGGGAGACACAAAGCCACCAGTCATCATCGTTGTCCACCATGGCTAGCATAGAAGGTGTTGCTGCAGGTTCGAGTGAGAACTTGAGCACCATGAGCAGGGAATTCAGCGCTCTCGTTCTTGCAGGATCGAACAACAGCCCAATGAATGACCCTCCAAATCATGGCGGAACTGAAGGAAGCAGAAACTTGGAGAGGATTCGAGAAGATGATATTGACAATCAATTGAGGACGATGATGATGGAGGAGACGAACCCTCTGGCAATCGTGCCGGATAACAACCCCTTAGACCCGGTGATTGCTTCTTCGCCGACGAGGCATGGTGGCGGTGGCGGCGGAGGAATGATGGTGGGTGGTGTTACGATCAGTGGGCAGAGCGAAGTGTGGGTGCAGAGAGTGAAGAAGGAGGAGATTGAAGCGAAGATTGCCGCGTGGCAGAACGCTAAGGTTGCTAAGATCAACAACAGATTCAAGAGGGAAGATTCTGTGATCAGTGGGTGGGAGAATGAGCAACTTCAGAAAACCACTTCATGGATGAACAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAAAGCACTTGAAAAAATGCAGAATGAAGTAGCAAAAGCTCATAGGAAAGCAGAGGAGAGAAGGGCATCAGCAGAGGCTAAAAGGGGAACTAAAGTTGCTAGGGTTCTTGAGGTTGCAAGCCTTATGAAAGCACTAGGAAGAACTCCTACCAAAAGATCCTTCTTTTAA 933 0.4716 MLNDQSTSTLSSTRRNHGREEQNNNNINDQGEDDQYIREIHALTPPLTTTTATMTANLRRRIREAWETQSHQSSSLSTMASIEGVAAGSSENLSTMSREFSALVLAGSNNSPMNDPPNHGGTEGSRNLERIREDDIDNQLRTMMMEETNPLAIVPDNNPLDPVIASSPTRHGGGGGGGMMVGGVTISGQSEVWVQRVKKEEIEAKIAAWQNAKVAKINNRFKREDSVISGWENEQLQKTTSWMNKVERKLEEKRAKALEKMQNEVAKAHRKAEERRASAEAKRGTKVARVLEVASLMKALGRTPTKRSFF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g1583 310 Coils Coil 243 282 - -
Ahy12g1583 310 MobiDBLite consensus disorder prediction 107 121 - -
Ahy12g1583 310 MobiDBLite consensus disorder prediction 1 31 - -
Ahy12g1583 310 MobiDBLite consensus disorder prediction 107 131 - -
Ahy12g1583 310 Pfam Remorin, C-terminal region 201 306 IPR005516 -
Ahy12g1583 310 PANTHER CARBOXY-TERMINAL REGION REMORIN 26 309 - -
Ahy12g1583 310 PANTHER OS02G0116800 PROTEIN 26 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g1583 Ahy-Chr12 85384125 85387869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g1583 - - ahf:112745528 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g1583 12 85384125 85387869 Ahy12g1583 12 85384125 85387869 ECH
Ahy12g1583 12 85384125 85387869 Ahy2g1343 2 69974784 69978105 hybridization
Ahy16g0397 16 7741457 7744689 Ahy12g1583 12 85384125 85387869 PCT
Ahy6g0927 6 12005078 12008332 Ahy12g1583 12 85384125 85387869 PCT
Ahy12g1583 12 85384125 85387869 Ahy16g0397 16 7741457 7744689 PCT
Ahy12g1583 12 85384125 85387869 Ahy6g0927 6 12005078 12008332 PCT