Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0276 ATGGCGGCTGTAACTGCTGCTATTCCTCGTACCGATCCGCCAATGGTCGTGTCGGATTCCTTCGCCAAGGACGCCATACTCGCCTGGTTCCGCGGCGAATTTGCTGCTGCAAATGCCATCATCGACGCCCTCTGCTCTCACCTCGCCGCCGCAGCCTCATCCTCCGACGAGTACGACGCCGTGTTCGCTGCCATACACCGCCGCAGGCTCAACTGGATTCCCGTCATCCAGATGCAGAAGTACCACTCCATTGCTGACGTGACTCTCGAGCTCCGCAAGGTCACCGAAAAGAAGACGGCGACGGCGGAGGAGGCGGAGGCGGAGAGTAATGGCGGCGGAGACGATGAGAAGGGGAAAGTGGAGGAGGAAGTGACGGAGAGTGTTGGAAATGGCGAAGGCGAAGGCGAAGCTCAACAGAGTCATGAGGAGTATGAATCTCCAGAGAGCGAGATTACTGATTCAGGATCTCAAGAAATGCACCCCAGTTTGACAAACATTAGCATATGTTCCAATCACGAAGAATGTGAAGGACGCTCATCACTGATAAAGTTGACAAAAGGTTTCCAAGCAAAGGAGTCAGTGAAGGGCCATATGGTCAATGTTGTGAAAGGATTGAAGTTATATGAAGCCATTTTCAATGACTCAGAAATCTGTAAGCTGACTGATTTTGTAAACGAGATCCATGTGGCTGGCCAGAAAGGGGAACTCTCCGGTGAAACTTTCATACTATTCAACAAGCAGATGAAGGGGAACAAGAGAGAGCTGATTCAGCTAGGTGTTCCAATATTCGGGCAGATAAATGATGCAAAGAGCAACATAGAACCGATTCCAGCACTTCTTCATGGTGTCATTGATCACCTTATACAATGGAAGTTAATTCCAGAGTATAAAAGGCCAAATGGTTGTATCATTAACTTCTTTGAGGAGGGGGAATTTTCTCAGCCATTCCTGAAACCACCCCATCTGGACCAGCCTATATCAACCCTTCTTCTCTCTGATTCAACTATGGCTTTTGGACGTATCCTAATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCATGCTCTCATTGAAGAAGGGGTCTCTTTTAGTGATGAGAGGAAATAGTGCAGACATGGCAAGGCACGTAATGTGTCCATCACCGAACAGAAGGATTAGCATCACCTTCTTTAGAGTGAGGCCAGACTCCAATCAATACCAGTCACTAACTCCTACCGTGACAAACGCAATGACTCTTTGGCAACCCGGCATTGCTAGCCCATATGCTGTGCCAAATGGAGCTGTAAGCAGCTATGAGACTATGGACATGATGCCCAAATGGGGAATACTTCATGCTCCAATGGTCATGCTAACAAACCCTGTACACCCTATGGCAATGAACCCTGGCAAACTTCCTGGTGGCGCTGGGACTGGGGTTTTCTTGCCTTGGAAGGTAGCATCCAGGAAACCTGCAAGGCATCTCCCACCTCGAGCCCAAAAGGGACGCCTTATGGCATTATCATCGCCAACCAATTCACATATGGGAGAGTCAACTTCTGAACCCAGCATTACAGTTGGAGGTTAA 1566 0.4891 MAAVTAAIPRTDPPMVVSDSFAKDAILAWFRGEFAAANAIIDALCSHLAAAASSSDEYDAVFAAIHRRRLNWIPVIQMQKYHSIADVTLELRKVTEKKTATAEEAEAESNGGGDDEKGKVEEEVTESVGNGEGEGEAQQSHEEYESPESEITDSGSQEMHPSLTNISICSNHEECEGRSSLIKLTKGFQAKESVKGHMVNVVKGLKLYEAIFNDSEICKLTDFVNEIHVAGQKGELSGETFILFNKQMKGNKRELIQLGVPIFGQINDAKSNIEPIPALLHGVIDHLIQWKLIPEYKRPNGCIINFFEEGEFSQPFLKPPHLDQPISTLLLSDSTMAFGRILMSENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNRRISITFFRVRPDSNQYQSLTPTVTNAMTLWQPGIASPYAVPNGAVSSYETMDMMPKWGILHAPMVMLTNPVHPMAMNPGKLPGGAGTGVFLPWKVASRKPARHLPPRAQKGRLMALSSPTNSHMGESTSEPSITVGG* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0276 521 SUPERFAMILY Clavaminate synthase-like 198 394 - -
Ahy16g0276 521 Pfam 2OG-Fe(II) oxygenase superfamily 303 392 IPR044861 -
Ahy16g0276 521 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 11 519 - -
Ahy16g0276 521 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 11 519 IPR044842 GO:0003729|GO:0006402|GO:0032451
Ahy16g0276 521 MobiDBLite consensus disorder prediction 100 162 - -
Ahy16g0276 521 MobiDBLite consensus disorder prediction 496 521 - -
Ahy16g0276 521 Gene3D - 188 402 IPR037151 -
Ahy16g0276 521 MobiDBLite consensus disorder prediction 111 126 - -
Ahy16g0276 521 MobiDBLite consensus disorder prediction 498 521 - -
Ahy16g0276 521 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 298 395 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0276 Ahy-Chr16 6142178 6149688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0276 K10767 - gmx:100796344 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0276 16 6142178 6149688 Ahy16g0276 16 6142178 6149688 ECH
Ahy16g0276 16 6142178 6149688 Ahy6g1051 6 13964973 13972206 hybridization
Ahy16g0276 16 6142178 6149688 Ahy12g2541 12 114531385 114538411 PCT
Ahy16g0276 16 6142178 6149688 Ahy2g2203 2 97897363 97904335 PCT
Ahy12g2541 12 114531385 114538411 Ahy16g0276 16 6142178 6149688 PCT
Ahy2g2203 2 97897363 97904335 Ahy16g0276 16 6142178 6149688 PCT