Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2541 ATGGCGGCTGGTCCAACCGATCGAGCTGCTCCCGCGGCGGCGCCTCTCCACAACCACCTCCACTCTCCGCCGGCGGCGCCGCTCATCGTTCCGGACTCATTCGCCAAGGACGCCATCCTCGCATGGTTCCGCGGAGAATTTGCCGCCGCAAACGCCATCATCGACGCTCTCTGCGCTCACCTCGCGCAATTGAGCTCCGTCTCCGGCGACGACGGCCGTTACGATGCGTTGTTCTCCGCCGTCCACCGCCGTAGGCTCAACTGGATCCCGGTGCTCCAGATGCAGAAGTATCACTCCATTGCTGACGTGGCGCTCGAGCTGCGAAACGTCACAGACCGAGAGAAAAATATCGCCGGAGAAAACGCCGCCGGTGAGATCGCCGATGAGAAGGAGAAGATCGGAGAAGAAAAGGTGACGGAAATCGAAGAGAACGGTGGCGAACATAACGAAGAGTATGAATCTCCGAAGAGCGAAATCACTGATTCAGGGTCTCAAGAAATGCAGGGAAGTTCAACGAACAATATTAACATATGTTCCAATCATGAAGAATGTGAAGGAAGATCATCACAGATCAAGTTAACTAAAGGTTTCTCAGCAAAGGAATCAGTGAAGGGGCACATGGTTAATGTTGTGAAAGGTTTGAAGTTATATGAAGATGTTTTCACTGATTCAGAACTTTGCAAGCTGACAGATTTTGTGAATGAGATCCATGCTGCCGGCCAGAATGGAGAACTCTCAGGTGAAACCTTCATTCTATTCAACAAACAAGTGAAAGGAAACAAGAGAGAGCTGATTCAGCTGGGTGTTCCATTATTTGGACAGATAAAGGAGGACACAAAAAGCAATATAGAGCCAATTCCAGCACTTCTTGAACATGTCATAGATCACCTTATACAATGGAAGTTAATTCCAGAGTATAAAAGGCCAAATGGGTGTATCATCAACTTTTTTGAAGAGGAGGAGTTTTCTCAGCCATTCCTGAAACCACCACATCTGGATCAACCTGTCTCCACTCTTGTTCTCTCTGAATCAACTATGGCTTTTGGGCGAATCCTTATGAGTGAAAATGATGGAAACTACAAGGGTCCACTCATGCTCTCATTGAAGATGGGGTCACTTCTGGTGATGAGAGGGAACAGTGCTGACATGGCAAGGCATGTGATGTGTCCATCTCCTAACAGAAGGGTCAGCATCACCTTCTTTAGAGTGAGGCCAGACTCAAACCAATCCCAATCACCAACCACACCAACAATGGCTGCAGGTGCAATGACCCTTTGGCAACCAAGCATTGCTAGCCCATATGGTGCTGCTATAACTGGTTATGATGGTATGGACATGATGATGCCAAAATGGGGTATGATCCGTGCCCCGATGGTGATGCTAGCCGCTGCCCCTGTGCCCCCTATGGTATTGAACCCTCGCAAGCTTGCCGGTGGTGGTACCGGTGTTTTCTTGCCATGGAATGTGCCATCAAGAAAACCTCCAAAGCATCTTCCGCCGAGGGCACAAAAAGGAAGGCTTCTAGCTTTAAGTGCCCCACCAGTTGAACCACACATTGGTGAGTCCACTTCAGAGCCAAGCATAAGTGTTGAAGGATAG 1599 0.4928 MAAGPTDRAAPAAAPLHNHLHSPPAAPLIVPDSFAKDAILAWFRGEFAAANAIIDALCAHLAQLSSVSGDDGRYDALFSAVHRRRLNWIPVLQMQKYHSIADVALELRNVTDREKNIAGENAAGEIADEKEKIGEEKVTEIEENGGEHNEEYESPKSEITDSGSQEMQGSSTNNINICSNHEECEGRSSQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLTDFVNEIHAAGQNGELSGETFILFNKQVKGNKRELIQLGVPLFGQIKEDTKSNIEPIPALLEHVIDHLIQWKLIPEYKRPNGCIINFFEEEEFSQPFLKPPHLDQPVSTLVLSESTMAFGRILMSENDGNYKGPLMLSLKMGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQSQSPTTPTMAAGAMTLWQPSIASPYGAAITGYDGMDMMMPKWGMIRAPMVMLAAAPVPPMVLNPRKLAGGGTGVFLPWNVPSRKPPKHLPPRAQKGRLLALSAPPVEPHIGESTSEPSISVEG* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2541 532 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 24 530 IPR044842 GO:0003729|GO:0006402|GO:0032451
Ahy12g2541 532 SUPERFAMILY Clavaminate synthase-like 204 404 - -
Ahy12g2541 532 MobiDBLite consensus disorder prediction 491 532 - -
Ahy12g2541 532 MobiDBLite consensus disorder prediction 141 170 - -
Ahy12g2541 532 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 24 530 - -
Ahy12g2541 532 Gene3D - 197 411 IPR037151 -
Ahy12g2541 532 MobiDBLite consensus disorder prediction 141 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2541 Ahy-Chr12 114531385 114538411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2541 K10767 - gmx:100791586 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2541 12 114531385 114538411 Ahy12g2541 12 114531385 114538411 ECH
Ahy12g2541 12 114531385 114538411 Ahy2g2203 2 97897363 97904335 hybridization
Ahy16g0276 16 6142178 6149688 Ahy12g2541 12 114531385 114538411 PCT
Ahy6g1051 6 13964973 13972206 Ahy12g2541 12 114531385 114538411 PCT
Ahy12g2541 12 114531385 114538411 Ahy16g0276 16 6142178 6149688 PCT
Ahy12g2541 12 114531385 114538411 Ahy6g1051 6 13964973 13972206 PCT