Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0171 ATGGAAGCAAAGTTTTTTCCATACAACAACACACTACTACGTATACGGTGTTCATCAAAAGCACACTTGATGATGAAACGTAAACCAGATGTTATAGTAGCGATGCACACAAGGCATCATCGTTCCTCTTCAGATGAATCTAGTAGTTTGATCCACAAAGATAATTGGTTTGATCGCTTAGCCATAAACCATCTTTCAAAATGTGTTCAAGATGCCACAGGATTAAGGAACAGTAAGAGCGGGTATGAGAGCCTCGTAGAGGCAGCTACGGTGGCTTCCCAGAAATTCGATCCCATTCAGCAACGACAGCTTGTCATTCAAGCTCTTCACACAACCTTACCAAACTTCATATTTTCATTCACGAAAATGTTACCACCATCGAAATTCACAAGACAAGTATTTGCAGCTTTTACCACCTTGTTCTTTGCCTGGTTAATTGGCCCCTCTCAGGTTAGAGAATCGGAGGTCAACGGAAGAAAGGAAAAAAACGTGGTTTACTTCAAAAAATGCAGGTTTTTAGAAGAGATGAATTTTGTAGGAATGTGTACTAATCTCTGTAAAATTCCAACTCAATCGTTTATAAAGGACTCTATGGGTATGCCAGTTACCATGGTCCCTAATTTTGATGACATGAGTTGTGAAATGATATTTGGGCAGGATCCTCCACCATTAATTGATGATCCAGCACTAAAGCAACCCTGCTATAAACTATGCAAGGCAAAGAAAAAGCATGAAACGGATAACTGCCTCAGTTAG 756 0.3995 MEAKFFPYNNTLLRIRCSSKAHLMMKRKPDVIVAMHTRHHRSSSDESSSLIHKDNWFDRLAINHLSKCVQDATGLRNSKSGYESLVEAATVASQKFDPIQQRQLVIQALHTTLPNFIFSFTKMLPPSKFTRQVFAAFTTLFFAWLIGPSQVRESEVNGRKEKNVVYFKKCRFLEEMNFVGMCTNLCKIPTQSFIKDSMGMPVTMVPNFDDMSCEMIFGQDPPPLIDDPALKQPCYKLCKAKKKHETDNCLS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0171 251 Pfam Beta-carotene isomerase D27-like, C-terminal 144 224 IPR025114 GO:0005506
Ahy16g0171 251 PANTHER BETA-CAROTENE ISOMERASE D27 16 246 IPR038938 -
Ahy16g0171 251 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 16 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0171 Ahy-Chr16 1806454 1817364 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0171 K17911 - gmx:100814646 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0171 16 1806454 1817364 Ahy6g1154 6 16841449 16855687 hybridization
Ahy16g0171 16 1806454 1817364 Ahy12g0800 12 14436445 14450360 PCT
Ahy16g0171 16 1806454 1817364 Ahy2g0671 2 10968612 10985202 PCT
Ahy12g0800 12 14436445 14450360 Ahy16g0171 16 1806454 1817364 PCT
Ahy2g0671 2 10968612 10985202 Ahy16g0171 16 1806454 1817364 PCT