Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3499 ATGCGAACCTTCATCGTACACAGCTCCAAGCTCATCAGAAGCAAGATCGAAAATATCCCTATGATTCAGCATCAGCATCAGCATCACCATCATCCGAATTTCAATCCCACGCGAGCAATGTCGCAATCCACCTCGATCCCGAAGAAAATGCAGAGGGTTCGCGACCACGGCTACGACAATTACATGGAAGTCGAGAAGAAGACGCGGAAGGTCCTCAAGGTCCAGAACATCATCCTCAACGAGCACAACCAATCGCTCCCAATCTCGCGCCTCGAAACCCTAGCGCACCGCATAGGCTTCACGCGCAACACAGTCGGTGCTTTCATCCTCAAGTTCCCTCACGTCTTCGAAATCTTCGAGCACCCCGTGCAGCGCGTGCTCTTCTGCCGCCTCACGCGCCAGGCAATCCTCCAAATCAAGCAGGAGAACGAAGCATTGCTCGCGCAGGTTCCACGCGCCGTCACGTGCCTCCGCAAGCTTCTCATGATGTCGAACACGCAGCGGCTTCGCCTCGAGCACGTGAGGATCGCACGCTCCGCTCTAGGGTTACCGGACGACTTCGAATTCTCGGTGGTTCTAAGGTATCCCCAATTTTTTCGCTTAGTTGATTCAAATGAGAGAAGGAACAAGTACATTGAGCTTGTAGAAAGAGAACCTAGTTTAGCAGTCTGTGCAATTGAGAATGTTAGAGAGAGAATTTACAGGGAGAGAGGTGGTGATGCTGAAGATGTTAGGTTCTCATTTCTAATTGATTTTCCACCAGGTTTTAAGATTGGGAAGTATTTTAAGATTGCAATGTGGAAGTGGCAGAGGTTACCTTATTGGTCCCCTTATGAGGATGTTTCTGGCTTTGATTTGAGGTCGATTGAGGCGCAAAAGAGGATGGAGAAGAGGGCTGTTGCCTCAATCCACGAGTTGTTGTCATTGACCGTGGAGAAGAAGATTACCTTGGAGAGGATCGCACACTTCCGGCAGGCGATGAACCTGCCGAATAAGTTGAAGGATTTCCTTCTCCAGCACCAGGGGATTTTCTACGTGTCGACAAGGGGGAACCAGGGGAAGCTCCACACGGTTTTCCTGCGAGAGGCTTATAGGAAGGGTGAGTTGATTGAGCCAAATGATCTGTATTTGGCGCGGAGGAAGCTGGCTGAGTTGGTCTTGTTGAGCCCCCGGAAGGCGAGGATTGACAGGGAATTGGTTGGATACAGGAGAAGCAGGTTGGATGATGAGATGGGGCAGATAGCAAGGGTAGCTGTGGAGGATCCTTGTGAGGACTTCAAGGATGGAGATGTAATGGATCAGGATAAGGATGAAGAGGGCAATTTGACCTCAGACATAGGTTCAGATGTTGATTCGGATGTTGGAGATGAAGACAATAGTTTTGATGAAGATAGTGTATCAAGGCAAGAAACATCATAA 1419 0.4954 MRTFIVHSSKLIRSKIENIPMIQHQHQHHHHPNFNPTRAMSQSTSIPKKMQRVRDHGYDNYMEVEKKTRKVLKVQNIILNEHNQSLPISRLETLAHRIGFTRNTVGAFILKFPHVFEIFEHPVQRVLFCRLTRQAILQIKQENEALLAQVPRAVTCLRKLLMMSNTQRLRLEHVRIARSALGLPDDFEFSVVLRYPQFFRLVDSNERRNKYIELVEREPSLAVCAIENVRERIYRERGGDAEDVRFSFLIDFPPGFKIGKYFKIAMWKWQRLPYWSPYEDVSGFDLRSIEAQKRMEKRAVASIHELLSLTVEKKITLERIAHFRQAMNLPNKLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNDLYLARRKLAELVLLSPRKARIDRELVGYRRSRLDDEMGQIARVAVEDPCEDFKDGDVMDQDKDEEGNLTSDIGSDVDSDVGDEDNSFDEDSVSRQETS* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3499 472 MobiDBLite consensus disorder prediction 425 443 - -
Ahy15g3499 472 MobiDBLite consensus disorder prediction 26 48 - -
Ahy15g3499 472 Pfam Plant organelle RNA recognition domain 53 389 IPR021099 GO:0003723
Ahy15g3499 472 MobiDBLite consensus disorder prediction 425 472 - -
Ahy15g3499 472 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 24 447 IPR040295 -
Ahy15g3499 472 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 24 447 IPR045040 GO:0003723
Ahy15g3499 472 MobiDBLite consensus disorder prediction 34 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3499 Ahy-Chr15 157734694 157736894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3499 - - adu:107491171 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3499 15 157734694 157736894 Ahy15g3499 15 157734694 157736894 ECH
Ahy15g3499 15 157734694 157736894 Ahy5g3089 5 112563936 112566104 hybridization