Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2325 ATGGCATCGGTGTACATTCCGGTGCAGAACTCGGAGGAAGAGGTTAGGGTTGCACTCGACCAACTTCCCAGGGACGCCTCCGACATCCTCGACATCCTCAAGGCCGAGCAAGCCCCTCTCGATCTCTGGCTCATTATCGCGAGGGAGTATTTCAAGCAGGGAAAAATTGATCAATTTCGCCAGATTTTGGAAGAGGGATCCAGCCCGGAAATCGATGACTACTATGCTGACGTTAGATATGAGAGAATTGCTATATTAAATGCCCTTGGGGCATACTATAGCTACCTTGGGAAAATCGAGACTAAACAAAGAGAAAAGGAGGAGCATTTCATTTTGGCAACTCAATATTACAATAAAGCATCGAGGATCGACATGCATGAGCCCTCGACATGGGTTGGGAAAGGTCAACTTTTGCTTGCAAAGGGAGAAGTAGAGCAGGCATCTGCTGCATTTAAGATTGTATTAGATGGAGACCGAGATAATGTTCCTGCTCTTCTCGGCCAGGCCTGTGTTGAGTTCAACCGAGGGCGGTATTCTGACTCACTTGAGTTGTACAAGAGAGCATTGCAAGTTTATCCCGATTGCCCTGCACCTGTTAGGCTTGGCATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCGACAGGCATTTGAGCGAGTTTTGCAGCTAGATCCAGAAAATGTTGAGGCTCTTGTAGCACTTGCAATAATGGACTTGCGTACCAATGAAGCTGCTGGAATTAGAAAGGGAATGGTAAAGATGCAGACGGCATTTGAGATATACCCTTATTGTGCAATGGCTCTGAATTATCTTGCAAATCATTTTTTCTTCACTGGTCAACATTTCTTGGTTGAGCAACTGACTGAAACTGCATTAGCTGTCACCAATCATGGTCCAACAAAGTCCCATTCTTATTATAATTTAGCGCGCTCTTACCATAGCAAGGGGGACTATGACAAAGCAGGGGTGTATTACATGGCATCTGTCAAGGAAGTCAACAAGCCTCATGAATTTGTGTTTCCTTATTATGGTCTAGGACAAGTGCAATTAAAGTTGGGAGATTTCAGAAGTGCCCTGTCAAATTTTGAAAAGGTTCTGGAGGTGTACCCGGATAATTGCGAGACATTAAAAGCACTGGCACACATATATGTTCAGCTTGGTCAAACTGACAAGGGACAGGACTTTATTAGGAAAGCAACAAAAATTGATCCCCGTGATGCCCAGGCATTTCTTGAACTGGGTGAATTGTTGATTCTGTCTGATACAGGATCTGCCCTCGATGCATTTAAAACTGCTCGTACTCTTTTTAAGAAGGGAGGCCAAGACGTACCAATAGAATTACTCAATAATATTGGTGTCCTTCAGTTTGAAAGGGGAGAGTTTGAGCTTGCTCAACAAACTTTTAAAGAGGCTTTGGGTGACGGCATATGGCTTTTTCTTATTAATGGGGGAAATAAGTCTTCCAATGATATTGCTACTTCTACACTACAGTTTAAGGACATGCAATTATTTCATAAGCTTGAAAGTACCGGTCATCATATAGATTTGCCCTGGGATAAAGTCACAGTGCTCTTTAACCTGGCCAGATTACTTGAGCAGTTAAATGATTCTGGAACTGCAAGTATATTGTATCGCCTAATATTATTCAGGTTTCCAGACTATATTGATGCGTATCTGAGGTTAGCTGCAATCGCAAAGGCTCGAAACAACATTCTGTTAAGCATTGAGCTGGTTCATGATGCGCTAAAGGTGAATGAAAAGTGTCCAAATGCATTATCTATGCTTGGTGATTTGGAGTTGAAAAATGATGATTGGGTAAAGGCAAAAGAAACTCTCAGGGCAGCCAGTGATGCAACTGATGGGAAGGACTCATATGCTACTCTTGCTCTTGGAAACTGGAATTACTTTGCAGCAGTTCGGAATGAGAAGAGAAATCCAAAGCTAGAAGCTACTCATTTGGAAAAGGCCAAGGAACTCTATACACGAGTTCTGATTCAGCATTCTGCAAATTTATATGCTGCCAATGGTGCTGGAGTAGTGCTAGCTGAGAAAGGCCATTTTGATGTTTCAAAGGATATCTTCACTCAGGTTCAAGAAGCTGCAAGTGGTAGTGTTTTTGTCCAGATGCCTGATGTTTGGATAAATTTGGCCCATGTTTATTTTGCTCAGGGAAATTTTTCTTTGGCTGTGAAAATGTATCAGAATTGCTTGCGAAAGTTTTTTTATAACACAGACTCGCAAATACTTCTATATTTAGCTCGTACTCATTATGAAGCAGAACAGTGGCAAGATTGTATAAAAACTCTACTAAGGGCAATCCATTTGGCACCCTCAAACTATACATTAAGATTTGACGCAGGTGTTGCGATGCAAAAGTTTTCAGCATCAACATTACAGAAGGCAAAAAGGACTGCAGATGAGGTGAGAGCAACTGTAGCAGAACTGCAAAATGCTGTTCGAGTATTTAGTCAGTTGTCTGCTGCATCCAACCTTCATATTCATGGGTTTGATGAGAAAAAAATTGACACTCATGTTGGGTACTGCAACCACCTACTTTCGGCTGCAAAAGTTCATCTTGAAGCAGCTGAGCGTGAGGAGCAGCAAGTGCGACAGAGGCAAGAACTTGCTCGTCAGGTTGCATTGGCCGAGGAAGCCCGACGGAAGGCTGAAGAGCAAAGGAAATTTCAGATGGAAAGGAGAAAGCAAGAGGATGAACTGAAGAGGGTGCAACAACAGGAGGAACATTTTAAGCGTGTTAAGGAACAATGGAAGAGCAGCTCACACTCAAGACGAAGGGAAAGGACACCAGAAGAAGAAGAGGGTGGGACTGGCGAGAAACGGAGAAAGAAAGGTGGAAAGAGGAGAAAGAAGGATAAGCACTCGAAATCACACTATGACAATGAAGAAGGAGAAGCCGATATGATGAATGAACCAGAGATGGAGGATGAAGATGTTGATAACTACAGAGAGCCCCAAACTATGGGGAATGATGATGCTGAGGGGAATGCTCAGGATCTTCTTGCAGCTGCTGGACTTGAAGATTCTGATGCAGAAGATGATATGGCTGCACCATCGTCAAACATTGCCCGCCGGAGGCAAGCGTTATCAGAATCTGATGATGATGAACCAATAATGCGGCAATCAAGTCCTATAAGAGAAAATTCTGCTGATATGGAGCTGAGTGATGGAGAAATCAGGGAGCCTAAGACAAATGGAGATGATGGTAGTGACTAG 3243 0.4311 MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFRQILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSDSLELYKRALQVYPDCPAPVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAIMDLRTNEAAGIRKGMVKMQTAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNHGPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQLKLGDFRSALSNFEKVLEVYPDNCETLKALAHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELLILSDTGSALDAFKTARTLFKKGGQDVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIWLFLINGGNKSSNDIATSTLQFKDMQLFHKLESTGHHIDLPWDKVTVLFNLARLLEQLNDSGTASILYRLILFRFPDYIDAYLRLAAIAKARNNILLSIELVHDALKVNEKCPNALSMLGDLELKNDDWVKAKETLRAASDATDGKDSYATLALGNWNYFAAVRNEKRNPKLEATHLEKAKELYTRVLIQHSANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFSLAVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFDEKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKFQMERRKQEDELKRVQQQEEHFKRVKEQWKSSSHSRRRERTPEEEEGGTGEKRRKKGGKRRKKDKHSKSHYDNEEGEADMMNEPEMEDEDVDNYREPQTMGNDDAEGNAQDLLAAAGLEDSDAEDDMAAPSSNIARRRQALSESDDDEPIMRQSSPIRENSADMELSDGEIREPKTNGDDGSD* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2325 1080 Coils Coil 801 821 - -
Ahy13g2325 1080 MobiDBLite consensus disorder prediction 895 1080 - -
Ahy13g2325 1080 SUPERFAMILY TPR-like 115 246 IPR011990 GO:0005515
Ahy13g2325 1080 SUPERFAMILY TPR-like 514 793 IPR011990 GO:0005515
Ahy13g2325 1080 ProSiteProfiles TPR repeat region circular profile. 342 375 - -
Ahy13g2325 1080 PANTHER RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 1 1044 IPR031101 GO:0006355|GO:0016570
Ahy13g2325 1080 Coils Coil 855 922 - -
Ahy13g2325 1080 ProSiteProfiles TPR repeat profile. 713 746 IPR019734 GO:0005515
Ahy13g2325 1080 MobiDBLite consensus disorder prediction 1036 1050 - -
Ahy13g2325 1080 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Ahy13g2325 1080 Pfam Tetratricopeptide repeat 168 228 - -
Ahy13g2325 1080 Gene3D Tetratricopeptide repeat domain 653 837 IPR011990 GO:0005515
Ahy13g2325 1080 Gene3D Tetratricopeptide repeat domain 344 500 IPR011990 GO:0005515
Ahy13g2325 1080 MobiDBLite consensus disorder prediction 1060 1080 - -
Ahy13g2325 1080 Pfam Tetratricopeptide repeat 353 412 - -
Ahy13g2325 1080 MobiDBLite consensus disorder prediction 895 950 - -
Ahy13g2325 1080 ProSiteProfiles TPR repeat profile. 342 375 IPR019734 GO:0005515
Ahy13g2325 1080 ProSiteProfiles TPR repeat region circular profile. 197 230 - -
Ahy13g2325 1080 SUPERFAMILY HCP-like 203 435 - -
Ahy13g2325 1080 ProSiteProfiles TPR repeat profile. 162 195 IPR019734 GO:0005515
Ahy13g2325 1080 MobiDBLite consensus disorder prediction 975 989 - -
Ahy13g2325 1080 Pfam Tetratricopeptide repeat 714 740 IPR019734 GO:0005515
Ahy13g2325 1080 Pfam Tetratricopeptide repeat 306 333 IPR019734 GO:0005515
Ahy13g2325 1080 Gene3D Tetratricopeptide repeat domain 7 335 IPR011990 GO:0005515
Ahy13g2325 1080 SMART tpr_5 558 591 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 592 625 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 749 782 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 162 195 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 713 746 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 128 161 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 342 375 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 448 477 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 376 409 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 197 230 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 305 338 IPR019734 GO:0005515
Ahy13g2325 1080 SMART tpr_5 524 557 IPR019734 GO:0005515
Ahy13g2325 1080 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
Ahy13g2325 1080 Gene3D Tetratricopeptide repeat domain 502 652 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2325 Ahy-Chr13 49903242 49917812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2325 178 408 EF-hand Containing Proteins AT2G32450 23.431 8.56e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2325 K15176 - gmx:100794371 1901.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2325 13 49903242 49917812 Ahy13g2325 13 49903242 49917812 ECH
Ahy13g2325 13 49903242 49917812 Ahy3g2038 3 46602827 46616367 hybridization