Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2111 ATGAGTAGTACTGGCAAGAGAAAGCTGATTCCGATGAACATGGAAGAGGCTGCACTCTTGTTGAGCCATGTGACTCAGCCTCGGATCCCATTCCTGCTTGCTTTACTGTTCCTCATTGCTTACTGGGTTTCTTGTTTCTCCAATTTGCTTCTCCTTGCACTTGCTCTTTGGACAACTATCCAATATCAGAGTTATCAACGCAAACTGCTTGAGGAGGACTTGAATAAGAAATGGCGCCGCATCATGCTCAACTCCTCGCCCGTTACACCATTGGAACACTGTGAATGGTTGAATAAGCTCTTGACTCAAGTCTGGCCCAACTATTTTAATCCAAAGCTTTCAAGAAGGTTATCCGCTATAGTGGAGAAGCGGTTAAAGCTCCGGAAACCGAGCCTTATAGAGAAAGTTGACCTGCGTGAGTTCTCGCTAGGATCATGCCCTCCAAGTTTGGGTCTTCAAGGGGTGCGGTGGTCAACTTCTGGTGATCAGCGGATCTTGAACATGGGTTTTGATTGGGACACTAGTGACATGAGTATTTTGATGCTTGCCAAGCTTGCCAAGCCATTGATGGGAACTACCCGAATTATGATTAACAGTCTTCATATCAAGGGTGATCTCCTCATTACACCAATTCTAGATGGAAAAGCCCTTCTGTATTCATTTTCATCAAAACCTGAGGTGAGAATTGGAATTGCGTTTGGAAGTGGCGGAACAGAGGTGCCTGGTGTTTCTTCTTGGCTGGAGAAACTTTTTACCGACACTTTGCTTAAAACCATGGTGGAACCTCGGCGCCGATGCTTCTCTTTGCCGGCAGTGAATTTAAGGAAAAGAGTTGTTGGAGGCATTATATATGTTACAGTGATTTCAGCCAACAAACTTTCTAGGAGTTGCTTTAAGGGAAGCCCATCTTTGAGGCAGCAAAATGGCTGCTTGGAAGAAAAATTGGATGACAAGGACCTGCAGACATTTGTGGAAGTAGAAGCAGAGGAATTGACAAGGAGGACAGGTGTGAGCCGAGGTTCAACACCAACATGGGATGCAACGTTTAATATGGTATTACATGACAGTACAGGAATTGTTCGCTTTAATCTTTATGAGTGCCTTCCCAGCAGTGTGAAGTATGACTACCTAGCAAGTTGTGAAATCAAGATGAGGCATGTTGAAGATGATTCGACAATAATGTGGGCAACTGGGCCGAACTCTGGTGTCATAGCAACACATGCAAAAGATTGTGGAGATGAAATCGAAATGACTGTTCCATTTGAGGGGTCCAACTCTGGAGAGTTGAAGGTGAGAATTGTAGTAAAAGAATGGCAATTTGCTGATGGTTCACATAGCTTGAACAGCCTCAGTACTAGCTCTCAGCCACCACTAAGTGAATCATCAAATCTGCAGTCAAAAACTGGAAGGAAACTTAGGATAACTGTTGTTGAAGCAAAAGATCTAGCTACAAAAGACAAATTTGGAAAAGTTGATACATATGTCAAACTGCAGTATGAAAAGACTATCCAGAAAACCATGAATGCTCAAACTCCAAATCCTATTTGGAATCAATCATTTGAATTTGATGAGACGGGTGGTGATGAATACCTAAATGTAAAGTGCTTTACTAATGAAGTTTTTGGAGATGAAAATATTGGTAGTGCTCATGTAAATTTGGAGGGACTAGTAGACGGCTCAGTCAAGGATGTGTGGATCCCTCTGGAAGGAGCGAGTTCTGGCGAGTTAAGACTTAAGATAGAAGTAGTTAAGGTGAATGACCAAGAAGGATCAAGGGATACAGCTTCGAGCTCACACAAAGGTTGGATAGAACTAGTTGTGATTGAAGCAAGGGATCTTATTGCTGCTGATCTTAGAGGGACAAGTGATCCTTATGTGAGGGTAGACTATGGAAACTTGAAGAAAAGGACAAAGGTTATTCCCAAGACTTTGAATCCTCAATGGAACCAGACCTTAGACTTCCTGGACGATGGCAGTCTCCTTGTACTGCGTGTTAAGGACCATAATGCTTTACTGCCCACATCAAGCATCGGTGAATGTGTTGTGGAATATCAAATGTTGCCTCCAAACCAGATGGTTGACAAGTGGATACCTCTCCAAGGGGTGAAAAGTGGCGAGATCCACATCCAAATTACAAGAAATGTCCCTGAGATGAAAATGAGACAAGTTGTGGATTCTGAACCTTCGTTAAGCACATTGCACCAAATTCCTACCCAGATGAAAGAGATGATGATGAAGTTTCGATCGTTAATAGATGACGGAAATGTTGAAGGACTGTCTAGGATTTTGAGTGAGCTAGAAACTCTGGAGGACACTCAGGAAGGATATATAGCGCAGCTGGAGACACAGCAAATGATGCTTCTCAGCAAAATAAAGGAATTAGGACAGCAGATCATCAATTCTTCTCCATCCCTTCAGAATTAA 2424 0.429 MSSTGKRKLIPMNMEEAALLLSHVTQPRIPFLLALLFLIAYWVSCFSNLLLLALALWTTIQYQSYQRKLLEEDLNKKWRRIMLNSSPVTPLEHCEWLNKLLTQVWPNYFNPKLSRRLSAIVEKRLKLRKPSLIEKVDLREFSLGSCPPSLGLQGVRWSTSGDQRILNMGFDWDTSDMSILMLAKLAKPLMGTTRIMINSLHIKGDLLITPILDGKALLYSFSSKPEVRIGIAFGSGGTEVPGVSSWLEKLFTDTLLKTMVEPRRRCFSLPAVNLRKRVVGGIIYVTVISANKLSRSCFKGSPSLRQQNGCLEEKLDDKDLQTFVEVEAEELTRRTGVSRGSTPTWDATFNMVLHDSTGIVRFNLYECLPSSVKYDYLASCEIKMRHVEDDSTIMWATGPNSGVIATHAKDCGDEIEMTVPFEGSNSGELKVRIVVKEWQFADGSHSLNSLSTSSQPPLSESSNLQSKTGRKLRITVVEAKDLATKDKFGKVDTYVKLQYEKTIQKTMNAQTPNPIWNQSFEFDETGGDEYLNVKCFTNEVFGDENIGSAHVNLEGLVDGSVKDVWIPLEGASSGELRLKIEVVKVNDQEGSRDTASSSHKGWIELVVIEARDLIAADLRGTSDPYVRVDYGNLKKRTKVIPKTLNPQWNQTLDFLDDGSLLVLRVKDHNALLPTSSIGECVVEYQMLPPNQMVDKWIPLQGVKSGEIHIQITRNVPEMKMRQVVDSEPSLSTLHQIPTQMKEMMMKFRSLIDDGNVEGLSRILSELETLEDTQEGYIAQLETQQMMLLSKIKELGQQIINSSPSLQN* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2111 807 Coils Coil 777 797 - -
Ahy13g2111 807 Gene3D C2 domain 280 432 IPR035892 -
Ahy13g2111 807 PANTHER OS01G0128800 PROTEIN 1 806 - -
Ahy13g2111 807 SMART C2_3c 471 565 IPR000008 -
Ahy13g2111 807 SMART C2_3c 282 396 IPR000008 -
Ahy13g2111 807 SMART C2_3c 602 696 IPR000008 -
Ahy13g2111 807 CDD C2 283 391 - -
Ahy13g2111 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 275 392 IPR035892 -
Ahy13g2111 807 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 90 270 IPR031468 GO:0008289
Ahy13g2111 807 PANTHER PLANT SYNAPTOTAGMIN 1 806 - -
Ahy13g2111 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 585 IPR035892 -
Ahy13g2111 807 ProSiteProfiles C2 domain profile. 452 566 IPR000008 -
Ahy13g2111 807 Gene3D C2 domain 455 584 IPR035892 -
Ahy13g2111 807 Gene3D C2 domain 585 714 IPR035892 -
Ahy13g2111 807 ProSiteProfiles C2 domain profile. 584 697 IPR000008 -
Ahy13g2111 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 597 712 IPR035892 -
Ahy13g2111 807 CDD C2 603 699 - -
Ahy13g2111 807 MobiDBLite consensus disorder prediction 446 466 - -
Ahy13g2111 807 Pfam C2 domain 603 699 IPR000008 -
Ahy13g2111 807 Pfam C2 domain 471 568 IPR000008 -
Ahy13g2111 807 Pfam C2 domain 282 390 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2111 Ahy-Chr13 39426537 39433686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2111 472 736 Lipid Metabolism Gene Families AT3G57880 26.646 3.84e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2111 - - ccaj:109803570 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2111 13 39426537 39433686 Ahy3g1814 3 37503848 37508969 hybridization
Ahy13g2111 13 39426537 39433686 Ahy15g2780 15 145330272 145339373 PCT
Ahy13g2111 13 39426537 39433686 Ahy5g2478 5 99628783 99637914 PCT
Ahy15g2780 15 145330272 145339373 Ahy13g2111 13 39426537 39433686 PCT
Ahy5g2478 5 99628783 99637914 Ahy13g2111 13 39426537 39433686 PCT