Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0441 ATGGCAGCCAATGCTTCTAATGGAGCAGCAAAGCAACCTCCTCAGCCATCTCCCTTGCGCTTCTCCAAGTTCTTTCAGTCCAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTTGACAGATTGATGGAAAATGAGAAGAATGAGGTCATAGTCGTTGATAACTTCTTCACTGGATCTAAAGACAACCTTAGAAAGTGGATTGGTCATCCTAGATTTGAGTTAATTCGTCACGATGTCACGGAGCAATTACTGGTGGAGGTTGATCAAATTTACCACCTTGCTTGCCCTGCTTCTCCGATTTTCTACAAATACAATCCTGTAAAGACCATAAAGACAAATGTGATTGGAACACTGAACATGCTCGGACTTGCTAAGCGAGTGGGAGCAAGGATTTTACTTACATCTACTTCAGAGGTATATGGAGATCCCCTTGTGCATCCACAACCAGAAACCTATTGGGGAAATGTTAACCCTATTGGAGTTCGAAGTTGTTATGATGAGGGCAAGCGAGTTGCAGAAACTTTGATGTTTGATTATCATAGGCAACATGGAATTGAAATCCGAATTGCAAGAATCTTTAATACATATGGACCTCGAATGAACATTGATGACGGCCGTGTTGTCAGCAATTTCATTGCTCAAGCACTCCGTGGTGAACCCCTAACGGTCCAACTTCCAGGAACTCAAACTCGCAGCTTCTGCTATGTCTCTGACATGGTTGATGGCCTTATCCGTCTAATGGAAGGCGAAAACACAGGTCCAATCAACATTGGGAACCCAGGCGAGTTTACTATGACTGAACTTGCTGAGACTGTGAAAGAGCTTATTAATCCAGATGTGGAAATCAAGATGGTTGAGAACACACCAGATGATCCAAGACAGAGAAAACCAGACATAACAAAAGCAAAGGAATTGCTTGGTTGGGAACCAAAGGTCAAGTTGAGGGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTTTGAGGCTTGGTGTTCCCAAAAAGAACTAA 1029 0.4315 MAANASNGAAKQPPQPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNFFTGSKDNLRKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAETVKELINPDVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVPKKN* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0441 342 CDD UGD_SDR_e 29 333 - -
Ahy13g0441 342 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 342 - -
Ahy13g0441 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 333 IPR036291 -
Ahy13g0441 342 Gene3D - 28 335 - -
Ahy13g0441 342 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 342 IPR044516 GO:0042732|GO:0048040|GO:0070403
Ahy13g0441 342 Pfam GDP-mannose 4,6 dehydratase 32 326 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0441 Ahy-Chr13 4559605 4563533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0441 26 341 Miscellaneous Gene Families AT1G02000 24.217 5.18e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0441 K08678 - gmx:100819843 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0441 13 4559605 4563533 Ahy13g0441 13 4559605 4563533 ECH
Ahy18g0406 18 3462604 3466430 Ahy13g0441 13 4559605 4563533 ECH
Ahy13g0441 13 4559605 4563533 Ahy18g0406 18 3462604 3466430 PCT
Ahy13g0441 13 4559605 4563533 Ahy8g1210 8 27463799 27467625 PCT