Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0256 ATGGCTTCTTCTGCTTCTGCTGGTGCCTCAGCTCGCGTGGATCTGGATGGGAACCCGATAAAGCCATTAACGATCTGCATGATCGGTGCCGGAGGGTTCATTGGCTCACACCTTTGCGAGAAGCTCATGTCCGAAACGCAGCACAAGGTTCTCGCATTGGATGTCTACAACGACAAGATCAAGCACCTCTTGGAGCCCGATAACCTTCCATGGCACGGTCGCATCACCTTCCACCGACTCAACATCAAGCACGATTCAAGGCTCGAAGGTCTCATCAAGATGTCGGATCTGACGATAAATCTGGCTGCAATTTGCACCCCTGCGGATTACAATACCCGTCCCCTTGACACAATTTACAGCAACTTCATCGATGCTCTCCCTGTGGTGAAGTACTGCTCTGAGAATAACAAGAGGCTTATTCACTTCTCTACTTGTGAAGTGTATGGGAAAACGATTGGAAGCTTTCTCCCCAAAGATAGTCCTCTTCGTCAGGATCCTGCATACTACGTTCTTAAAGAAGATGAGTCTCCATGCATTTTTGGTTCGATTGAGAAGCAGAGATGGTCCTATGCCTGTGCAAAGCAGTTGATTGAGAGGCTGATTTATGCTGAGGGTGCTGAAAATGGTATGGAGTTCACAATTGTGAGGCCTTTTAATTGGATTGGACCTAGAATGGATTTCATTCCTGGCGTTGATGGTCCTAGTGAGGGTGTTCCCCGGGTTCTTGCATGCTTTAGCAATAATCTTCTCAGAGGGCAGCCCCTCAAGCTAGTGGACGGTGGCCAATCCCAGAGAACCTTTGTTTACATCAAGGATGCTATTGAAGCTGTAACACTGATGATTGAAAACCCTGCCAGGGCTAATGGACATATCTTCAATGTGGGTAACCCCAACAATGAGGTTACAGTTCGGCAGCTTGCTGAAATGATGATTAAGGTATACTCAAAGGTAAGTGGAGAACAACCTCCAGAGACACCTACAATCGACGTCAGCTCGAAAGAATTTTATGGCGAGGGATATGACGATAGCGACAAGAGAATTCCTGACATGACCACAATAAACAGGCAGCTTGGATGGAACCCAAAGACCTCACTTTGGGACCTGCTTGAGTCCACACTGACCTATCAGCACAGGACATATGCTGAAGCCATTAAGAAAGTCATTGCTAAACCTGTTGCAAGTTGA 1185 0.4717 MASSASAGASARVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETQHKVLALDVYNDKIKHLLEPDNLPWHGRITFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGMEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRGQPLKLVDGGQSQRTFVYIKDAIEAVTLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIKVYSKVSGEQPPETPTIDVSSKEFYGEGYDDSDKRIPDMTTINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0256 394 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 11 393 - -
Ahy13g0256 394 Pfam NAD dependent epimerase/dehydratase family 25 295 IPR001509 -
Ahy13g0256 394 PANTHER - 11 393 - -
Ahy13g0256 394 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 377 IPR036291 -
Ahy13g0256 394 CDD Arna_like_SDR_e 24 379 IPR045869 GO:0016831
Ahy13g0256 394 Gene3D - 23 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0256 Ahy-Chr13 2624850 2628002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0256 23 389 Miscellaneous Gene Families AT1G02000 20.716 3.62e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0256 K12449 - gmx:102667779 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0256 13 2624850 2628002 Ahy13g0256 13 2624850 2628002 ECH
Ahy18g0562 18 5487942 5491221 Ahy13g0256 13 2624850 2628002 PCT
Ahy8g1365 8 29806372 29809593 Ahy13g0256 13 2624850 2628002 PCT
Ahy13g0256 13 2624850 2628002 Ahy18g0562 18 5487942 5491221 PCT
Ahy13g0256 13 2624850 2628002 Ahy8g1365 8 29806372 29809593 PCT