Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2563 ATGCCGGGGTTAGTGATGGTAACGAGAGGCGGCGGATGCGGTGGAGGAGGGAAGAGAGCGAGACCTGATGCTACGGCGGCGGAAGAAGAAGAGCAGAGACAGCTGTCACTAGTGGCGTTATTGATAGCGGCGCTGAGAAAATCTATGGTGGCTTGCAGAGTAGACAGACCATCAGAAGAAGTGATCTCCACTGTCCATCATAATCACCAGATGGAGATCGGATGGCCGACAGACGTCCAGCACATCACACATGTAACGTTTGATCGATTCAATGGCTTCCTCGGTCTCCCTCTTGAGTTCCAAGTTGAGATCCCCGGTCGCGTTCCCAGTGCTAGTGTGAGTGTGTTTGGGGTCTCAGCAGAATCTATGCAGTGTTCTTATGATTCCAAAGGAAACAGTGTCCCCACTATTCTATTGCTAATGCAGGACCGTTTATACTCACAAGGAGGCTTAAAGGCTGAAGGTATATTTCGGATAAATCCGGAAAATAGTCAAGAGGAGCATGTGAGGGATCAGTTAAACAGAGGCATTGTGCCGGACAACATCGATGTCCATTGCTTGGCCGGGCTAATTAAAGCCTGGTTCCGGGAGCTTCCTTCGGGGATACTAGATGGACTCTCACCAGAGCAAGTTCTTCAGTGCAACACGGAAGAAGAGTCCGTTGAGCTCGTGAAGCAGCTAAAGCCAACGGAGTCTGCATTGCTCAGCTGGGCTATTGATCTCATGGCTGATGTTGTGGAAGAGGAGGAGTGTAACAAAATGAATGCTAGAAATATTGCAATGGTTTTTGCCCCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTGATGAACTTGCTCAAGACACTGATAATGAAGAATCTAAGAGAACGTGAAGAAACCACAACCGGATATTCTCCCATGTCATTTCGCTCATCGAATCACCAGTCCGAGGAAGAATATGACAGTCAGCGAGAAACAGACACCAGTGGTGAATTGAGAGGGACTAAGTCGGATTATAACGATCATCACCCTCACTATAGCCATAGCAGTGAAGGGGAGGAAGAAAGGGAGGCTGAATCTTTAAGCGAGATTGAAGAATGCTTCTTGAAGCAGTTGGATGATGATAACACAAAAGGGTTCTCACAACAAGAACCTTCAGGCTATTTGCAAGAGTACATTAACCCTATAAGTTGTTGCTCAGGTTTTAGCATCAAATCCATTGCATCAATTGCCGACGGAACCATAAATTCCAGCTTGAGTTCCATTGATGGAGAAAGGTTGAGGACAAGGGTGGCTGCCGTGAGCTCAAACATTGAAAAAAGCAGCCCGTCAATAGAATGTACAGGAACCAATGACGTGAAGATGATTGATAAGTTTTCCGATTCTGCTCCGCCGCTGCTTGCATCTAGTTGA 1416 0.471 MPGLVMVTRGGGCGGGGKRARPDATAAEEEEQRQLSLVALLIAALRKSMVACRVDRPSEEVISTVHHNHQMEIGWPTDVQHITHVTFDRFNGFLGLPLEFQVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDNIDVHCLAGLIKAWFRELPSGILDGLSPEQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEECNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKNLREREETTTGYSPMSFRSSNHQSEEEYDSQRETDTSGELRGTKSDYNDHHPHYSHSSEGEEEREAESLSEIEECFLKQLDDDNTKGFSQQEPSGYLQEYINPISCCSGFSIKSIASIADGTINSSLSSIDGERLRTRVAAVSSNIEKSSPSIECTGTNDVKMIDKFSDSAPPLLASS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2563 471 Pfam P21-Rho-binding domain 72 102 IPR000095 -
Ahy12g2563 471 Pfam RhoGAP domain 135 269 IPR000198 GO:0007165
Ahy12g2563 471 MobiDBLite consensus disorder prediction 315 356 - -
Ahy12g2563 471 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 439 - -
Ahy12g2563 471 ProSiteProfiles Rho GTPase-activating proteins domain profile. 118 299 IPR000198 GO:0007165
Ahy12g2563 471 SUPERFAMILY GTPase activation domain, GAP 114 292 IPR008936 GO:0007165
Ahy12g2563 471 SMART RhoGAP_3 132 295 IPR000198 GO:0007165
Ahy12g2563 471 Gene3D Rho GTPase activation protein 105 297 IPR008936 GO:0007165
Ahy12g2563 471 SMART PBD_5 73 107 IPR000095 -
Ahy12g2563 471 PANTHER MKIAA1688 PROTEIN 1 439 IPR044785 GO:0005096
Ahy12g2563 471 MobiDBLite consensus disorder prediction 300 363 - -
Ahy12g2563 471 CDD RhoGAP 135 294 - -
Ahy12g2563 471 Gene3D CRIB domain 67 104 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2563 Ahy-Chr12 114937282 114940588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2563 - - gmx:100807134 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2563 12 114937282 114940588 Ahy12g2563 12 114937282 114940588 ECH
Ahy12g2563 12 114937282 114940588 Ahy2g2225 2 98180081 98183394 hybridization
Ahy16g0550 16 10335502 10337975 Ahy12g2563 12 114937282 114940588 PCT
Ahy6g0764 6 9402546 9405021 Ahy12g2563 12 114937282 114940588 PCT
Ahy12g2563 12 114937282 114940588 Ahy16g0550 16 10335502 10337975 PCT
Ahy12g2563 12 114937282 114940588 Ahy6g0764 6 9402546 9405021 PCT