Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0629 ATGGAAGATTCTTCACAAAGGTATGCAGTTGTGACCGGAGCAAATAAAGGAATTGGATTAGAAATAGTAAGGCAATTGGCTTCAAATGGAGTGAAGGTTGTGTTGACTTCAAGAGATGAAAAGAGAGGCCTTCATGCATTGGAGACACTCAAAGATCTCTCTGATTTTGTGCTTTTTCACCAGCTTGATGTTGCTGATCCTGCAAGTGTTGCTTCTCTTGCAGATTTCATCAAATCCAAATTTGGCAAACTTGATATTCTGGTTAACAATGCAGGGGTTAGTGGAGTTGTGATTAAAGACACTGATTTACTCCCTTCATTAATAATGAAAGGCGAGGAATTATCTGAGGATGAAATAGAAAAGACAAGGAGTCAAACATATGAATTAGCACAAGATTGTTTTCAAATAAATTATTATGGTGCTAAAAGAACTTCCGAATCTCTTCTTTCCCTGCTCCAGTTATCTGATTCACCAAAAATCGTGAATGTATCATCTTTTTTGGGAAAGTTAAAGTGTGTATTAAATGAATGGGCTAAAGGGGTGTTCAATGACGCTGATAACCTTACAGAAGAGAAAATAGATATGGTATTGAATGAGTTTCTAAAAGATTTCAAAGAAGGGAGATTAGAAAGCAAAGGATGGCCTAAGGCTGCTAGTGCTTACATTCTCTCGAAAGCTGCTTTGAATGCATATACAAGAATTCTTGCTAAGAAGTTCCCTACATTTTGCATCAATAGTGTGTGTCCTGGTTATGTTAAAACTGATATGACTGCAAATACTGGCTTCATAACTGTGGAAGAAGGTGCTGCTAGTCCTGTGAGGTTGGCACTACTTCCAAATGGTAGTCCTTCTGGCTTCTTTTATGATCGGAGTCAAATCTCTTTCTATTAA 891 0.3749 MEDSSQRYAVVTGANKGIGLEIVRQLASNGVKVVLTSRDEKRGLHALETLKDLSDFVLFHQLDVADPASVASLADFIKSKFGKLDILVNNAGVSGVVIKDTDLLPSLIMKGEELSEDEIEKTRSQTYELAQDCFQINYYGAKRTSESLLSLLQLSDSPKIVNVSSFLGKLKCVLNEWAKGVFNDADNLTEEKIDMVLNEFLKDFKEGRLESKGWPKAASAYILSKAALNAYTRILAKKFPTFCINSVCPGYVKTDMTANTGFITVEEGAASPVRLALLPNGSPSGFFYDRSQISFY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0629 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Ahy12g0629 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Ahy12g0629 296 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 IPR002347 -
Ahy12g0629 296 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 294 - -
Ahy12g0629 296 Pfam short chain dehydrogenase 8 170 IPR002347 -
Ahy12g0629 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 282 IPR036291 -
Ahy12g0629 296 Pfam Enoyl-(Acyl carrier protein) reductase 212 261 - -
Ahy12g0629 296 PANTHER SALUTARIDINE REDUCTASE-LIKE 1 294 - -
Ahy12g0629 296 Gene3D - 1 296 - -
Ahy12g0629 296 PRINTS Glucose/ribitol dehydrogenase family signature 152 168 IPR002347 -
Ahy12g0629 296 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Ahy12g0629 296 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Ahy12g0629 296 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
Ahy12g0629 296 PRINTS Glucose/ribitol dehydrogenase family signature 240 257 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0629 Ahy-Chr12 10202881 10206256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0629 7 257 Acyl Lipid Metabolism Gene Families AT1G63380 25.287 2.42e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0629 K15095 - gmx:100801677 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0629 12 10202881 10206256 Ahy12g0629 12 10202881 10206256 ECH
Ahy12g0629 12 10202881 10206256 Ahy2g0527 2 7539003 7544037 hybridization
Ahy12g0629 12 10202881 10206256 Ahy14g2380 14 126608166 126621413 PCT
Ahy12g0629 12 10202881 10206256 Ahy4g2098 4 114893158 114922991 PCT