Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0438 ATGGCATCAACCTCTTCCTCAACTCTTACAATATCATCTTCTTCCACCATTTTTGATGGCAAAGCTCTAAGGAATTCAGCAACTTCACCACAATGTGTGAGCCTTCCAACTCTCCCTCCTCCAACTTTGCAAGCTCAAATTCGCCAATGGAAGCCCAATGCTTATTGCCGCAAGATTGCTAGGAATGTTATGGCAATGGCCACAGGAGAGGCACCATCAGAAATTGCCACTACTGAAACTCCAGAAATTGTTAAGACTGTTCAAGAAGCTTGGGATAAAGTTGAAGACAAGTATGCAGTGAGTTCACTAGGGGTAGCTGCTTTGATTGCATTGGTTGGCTCCACTGGTTTGGTCTCAGCAATTGATAAGCTTCCTTTGATCCCTGGGATTTTAGAGGTTGTAGGCATTGGTTACACTGGGTTGTTTGTTTACAAGAATCTAGTATTCAAGCCAGATAGGGAGGCATTGGTGAGGAAAATAAAAGAAACATATGAAGAAATAACTGGAAGCAACTAA 516 0.4244 MASTSSSTLTISSSSTIFDGKALRNSATSPQCVSLPTLPPPTLQAQIRQWKPNAYCRKIARNVMAMATGEAPSEIATTETPEIVKTVQEAWDKVEDKYAVSSLGVAALIALVGSTGLVSAIDKLPLIPGILEVVGIGYTGLFVYKNLVFKPDREALVRKIKETYEEITGSN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0438 171 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 85 169 IPR025564 -
Ahy12g0438 171 PANTHER - 1 170 IPR033344 GO:0009579
Ahy12g0438 171 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0438 Ahy-Chr12 6751141 6754297 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0438 - - mnt:21402557 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0438 12 6751141 6754297 Ahy12g0438 12 6751141 6754297 ECH
Ahy12g0438 12 6751141 6754297 Ahy2g0395 2 5347046 5348106 hybridization
Ahy12g0438 12 6751141 6754297 Ahy2g0396 2 5350994 5353898 hybridization
Ahy14g1588 14 81321634 81326183 Ahy12g0438 12 6751141 6754297 PCT
Ahy4g1397 4 68057533 68062267 Ahy12g0438 12 6751141 6754297 PCT
Ahy12g0438 12 6751141 6754297 Ahy14g1588 14 81321634 81326183 PCT
Ahy12g0438 12 6751141 6754297 Ahy4g1397 4 68057533 68062267 PCT