Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g0342 ATGGAAGAGAAGAAAGCAAAGGCCAAAGCTTTTCTTCTCTTCTTCTTCTTCTTCTTCTCAGTGTTCATCACACTCTCCACCGCCACCAAAGAAACCCAAACCCTTATCCTCCACCCACTCCCATCTCAACCCACCCTCTATTGGCCCGAACTCGAAACCGAGCAACCCGACCCGGAACCCGAATCAGCTTCGCTCTCTGTCTCTCTTCACCACATCGATGCACTCTCTTCCAACAAAACACCGCACGAATTGTTTACCCAAAGGCTCCAAAGGGACGCTGCTAGGGTCAAAATCGTAACTTCCTTCGTCTCCAAAGCTCCATTTTCTTCTTCACCCAAGAACCAAACCGGGTTCGGATCACAACCCGGTTTCAGCTTCAGCAGCTCAGTCATTTCGGGTTTGGCTCAGGGCAGCGGCGAGTACTTCACGCGCCTCGGCGTCGGAACGCCGCCACGCTACCTCTACATGGTGCTCGACACCGGAAGCGACGTCGTTTGGCTCCAATGTGCGCCGTGCAAGAAGTGCTACTCAGAGTCCGACCCAGTTTTCGACCCGAAAGGGTCCCGGACCTTTGCCCCAGTACCCTGCGGTTCTCCGCTCTGCCGGCAGCTGGACTCGCCGGGATGCGACGCCCGGAAAAAGGTGTGCGAGTATCAGGTCTCATATGGAGACGGGTCCTTCACCGTCGGCGATTTTGCCACTGAGACATTGACTTTCCGGCGACGCGCCAGCGTCCCGCGCGTGGCCTTAGGCTGTGGACATGACAACGAGGGGCTCTTTGTTGGGGCTGCGGGCCTTTTGGGCCTGGGCCGGGGCATGCTTTCCTTTCCGACCCAAGCCGGTGCCCGGTTCAATAACAAATTCAGTTATTGTTTAGTGGACCGAGCTGCTTCATCAAAACCGTCTTCAATGGTTTTTGGTGATTTGGCAGTTTCGAGAGCGGCACGGTTCACTCCGTTGTTAAAGAACCCAAAGCTCGACACATTTTACTATGTCGAACTGTTGGGAATTAGTGTTGGCGGGGTGCTGGTTCGTGGAATTTCGGCTTCTTTGTTTCGGCTTGACCGGACCGGAAATGGTGGGGTAATTATTGACTCGGGCACCTCAGTGACTCGATTGACCCGACCCGCTTATGAGGCTTTGAGAGACGCTTTTCGGGTTGGGGCAGCCCGATTGAAACGGGCACCCGAATACTCGTTATTTGATACTTGCTTTGATCTTTCGGGGATGACGCAAGTGAAAGTTCCGACCGTAGTGCTACATTTTCGAGGTGCCGATGTGTCACTTCCAGCCGGGAATTACCTAATTCCGGTGGATGATAAGGGAACTTACTGTTTCGCGTTCGCTGGGACGATGAGCGGGTTATCCATAATTGGGAATATCCAGCAACAAGGGTTTCGGGTCGTGTTTGATTTGGCGGGTTCTCGGATCGGGTTTGCACCAAGAGGGTGCGCATAA 1458 0.5391 MEEKKAKAKAFLLFFFFFFSVFITLSTATKETQTLILHPLPSQPTLYWPELETEQPDPEPESASLSVSLHHIDALSSNKTPHELFTQRLQRDAARVKIVTSFVSKAPFSSSPKNQTGFGSQPGFSFSSSVISGLAQGSGEYFTRLGVGTPPRYLYMVLDTGSDVVWLQCAPCKKCYSESDPVFDPKGSRTFAPVPCGSPLCRQLDSPGCDARKKVCEYQVSYGDGSFTVGDFATETLTFRRRASVPRVALGCGHDNEGLFVGAAGLLGLGRGMLSFPTQAGARFNNKFSYCLVDRAASSKPSSMVFGDLAVSRAARFTPLLKNPKLDTFYYVELLGISVGGVLVRGISASLFRLDRTGNGGVIIDSGTSVTRLTRPAYEALRDAFRVGAARLKRAPEYSLFDTCFDLSGMTQVKVPTVVLHFRGADVSLPAGNYLIPVDDKGTYCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRIGFAPRGCA* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g0342 485 SUPERFAMILY Acid proteases 134 484 IPR021109 -
Ahy12g0342 485 CDD cnd41_like 140 484 IPR033873 -
Ahy12g0342 485 Pfam Xylanase inhibitor C-terminal 330 480 IPR032799 -
Ahy12g0342 485 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 34 484 - -
Ahy12g0342 485 Pfam Xylanase inhibitor N-terminal 141 308 IPR032861 -
Ahy12g0342 485 ProSiteProfiles Peptidase family A1 domain profile. 141 480 IPR033121 -
Ahy12g0342 485 PANTHER ASPARTYL PROTEASES 34 484 IPR001461 GO:0004190|GO:0006508
Ahy12g0342 485 Gene3D Acid Proteases 306 485 IPR021109 -
Ahy12g0342 485 Gene3D Acid Proteases 125 305 IPR021109 -
Ahy12g0342 485 PRINTS Pepsin (A1) aspartic protease family signature 456 471 IPR001461 GO:0004190|GO:0006508
Ahy12g0342 485 PRINTS Pepsin (A1) aspartic protease family signature 147 167 IPR001461 GO:0004190|GO:0006508
Ahy12g0342 485 PRINTS Pepsin (A1) aspartic protease family signature 362 373 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g0342 Ahy-Chr12 4881934 4883640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy12g0342 131 484 Miscellaneous Gene Families AT1G77480 28.052 5.35e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g0342 K22683 - gmx:100791511 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g0342 12 4881934 4883640 Ahy12g0342 12 4881934 4883640 ECH
Ahy16g1226 16 22523345 22525402 Ahy12g0342 12 4881934 4883640 PCT
Ahy6g0195 6 2482473 2484542 Ahy12g0342 12 4881934 4883640 PCT
Ahy12g0342 12 4881934 4883640 Ahy16g1226 16 22523345 22525402 PCT
Ahy12g0342 12 4881934 4883640 Ahy6g0195 6 2482473 2484542 PCT