Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2032 ATGAGGTGGGAAAAGGTTCAGATGAACCCTTTAGAGGGCAATGATGGAGGAGGGCCAGGGAAGAGGTGGGGACACACCTGCAACGCCATTAGAGGTGGCAGACTTGTCTATGTCTTCGGTGGTTATGGCAAAGATAACTGTCAGACCAACCAAGTTCATGTCTTTGACACTGTGAAACAGACTTGGAGCCAACCTGCAATAAAAGGCACCCCGCCTACTCCTAGAGACAGCCATACTTGCACTGCAATTGGTGATAATCTGTATGTGTTTGGGGGTACCGATGGCATGAACCCGTTGATGGATTTGCATATTCTAGACACTTCTTCAAATACGTGGATATCTCCAACTATAAGAGGCGAAGGGCCAGAGGCACGGGAGGGTCATAGTGCTGCAGTTGTTGGCAAACGGCTATTCATCTTTGGTGGTTGTGGAAAATCTGCAGATAATAATACTGAAGTCTACTATAATGATCTTTATATATTGAATACTGAAACATTTGTATGGAAGTGTGCTCAAACATCAGGCACTCCACCATCTCCTCGCGATAGCCATACTTGCTCGTCTTGGAAAAACAAAATTATCGTGTTAGGGGGTGAAGATGGTCATGATTATTACTTGTCTGATGTCCACATCCTTGATACTGATACTCTAATTTGGAGGGAGCTGAGTACATCAGGCCAACTGTTGCCTCCACGAGCTGGTCATTCTACTGTCGCTTTTGGCAAGAACTTGTTTGTATTTGGCGGATTTACGGATGCACAAAACCTATACAATGACCTCTATATGCTTGACATCGATACTGGTATTTGGACAAATGTTGCAACGACTACCAATGGCCCTTCTGCTCGATTTTCTGTAGCCGGTGACTGTTTAGACCCATTTGTGGGCGGTGCTCTTGTGTTCATCGGTGGTTGTAATAAAAGCCTCGAGGCCCTGGACGACATGTATTTCCTCTACACAGGGATTGCTAGGGAAAGCGAACAGAGACCAGAGAAGTTATCTTTAAGAAAGCAGTTGAAACTAAAATGCCAAGAGCAAAATACCAATCCCGTTCAAAATCAAGTTCTGGTTAGATATGGAGTCGGTGCTGATGTTAGCCCGCTCATGACAGTGTTGAATTATAGCCAGCCAAGTAGACTAAATCTCCCAGTAAATCAAGGCTTCACTCCTGGAAAGAAAATGTTTGAATGCAAGGTTACTGAATCCATCTCGGAAGGTTATACTATCGAAACTATTATTGATGGAAAGCTTCTTCGAGGTGTTCTGTTTTCAAATAAGCCAAAGTCTTTGCACCCAGCTGCTAATACTTCAACCAGGAAAAGGGCCGGTGGTGAAACTGACGTTATCTCAAATGGTATACACCCTGATAAATCAAAGATTCCTAAAGTGACCAATCAAGATGAAACAGAAAACAGACAAGCAGTTCACGGAGACAGTTTAGAATCTCATGAACACCGTGCTGAAGGGGTTGCTGCTCTTCTATCAAGCAACCTGACAGCTGCTGACACTTCTGATACCCATAAGGTTTCTGCTAACCCAGAACGAAATGATGATGGAAAGAATGAAGCACCCCAACCCGTAGGTGAAAACGTGAAAAATGATGGAGCAAATGACATAGTAAGTTCAAAAACTGATGGGCAAACAAGTGTACCAATTTCCAATTTTGAAGTTCCAAGACATGATAACAAAAGCGATGCACCAAACTGCAACTTTGAATTTCTGAAACCTTCTGCAGCCGAGACTGCTGTCTGTCTGCCAAATCAAGGTGTAATGGCGGATTGCACGACCCCAAGGACAGAAGAATGCAGCAAACCAGCAAAGCTAATTTGA 1830 0.4383 MRWEKVQMNPLEGNDGGGPGKRWGHTCNAIRGGRLVYVFGGYGKDNCQTNQVHVFDTVKQTWSQPAIKGTPPTPRDSHTCTAIGDNLYVFGGTDGMNPLMDLHILDTSSNTWISPTIRGEGPEAREGHSAAVVGKRLFIFGGCGKSADNNTEVYYNDLYILNTETFVWKCAQTSGTPPSPRDSHTCSSWKNKIIVLGGEDGHDYYLSDVHILDTDTLIWRELSTSGQLLPPRAGHSTVAFGKNLFVFGGFTDAQNLYNDLYMLDIDTGIWTNVATTTNGPSARFSVAGDCLDPFVGGALVFIGGCNKSLEALDDMYFLYTGIARESEQRPEKLSLRKQLKLKCQEQNTNPVQNQVLVRYGVGADVSPLMTVLNYSQPSRLNLPVNQGFTPGKKMFECKVTESISEGYTIETIIDGKLLRGVLFSNKPKSLHPAANTSTRKRAGGETDVISNGIHPDKSKIPKVTNQDETENRQAVHGDSLESHEHRAEGVAALLSSNLTAADTSDTHKVSANPERNDDGKNEAPQPVGENVKNDGANDIVSSKTDGQTSVPISNFEVPRHDNKSDAPNCNFEFLKPSAAETAVCLPNQGVMADCTTPRTEECSKPAKLI* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2032 609 Gene3D - 1 65 IPR015915 GO:0005515
Ahy11g2032 609 Gene3D - 66 150 IPR015915 GO:0005515
Ahy11g2032 609 Gene3D - 151 376 IPR015915 GO:0005515
Ahy11g2032 609 SMART kelc_smart 86 135 IPR006652 GO:0005515
Ahy11g2032 609 SMART kelc_smart 35 85 IPR006652 GO:0005515
Ahy11g2032 609 SMART kelc_smart 192 242 IPR006652 GO:0005515
Ahy11g2032 609 SMART kelc_smart 243 289 IPR006652 GO:0005515
Ahy11g2032 609 Pfam Kelch motif 122 166 - -
Ahy11g2032 609 Pfam Galactose oxidase, central domain 34 83 - -
Ahy11g2032 609 MobiDBLite consensus disorder prediction 427 486 - -
Ahy11g2032 609 PANTHER KELCH REPEAT DOMAIN 1 474 - -
Ahy11g2032 609 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 1 474 - -
Ahy11g2032 609 MobiDBLite consensus disorder prediction 535 555 - -
Ahy11g2032 609 Pfam Galactose oxidase, central domain 180 225 - -
Ahy11g2032 609 Pfam Galactose oxidase, central domain 231 278 - -
Ahy11g2032 609 MobiDBLite consensus disorder prediction 460 486 - -
Ahy11g2032 609 MobiDBLite consensus disorder prediction 1 21 - -
Ahy11g2032 609 SUPERFAMILY Galactose oxidase, central domain 16 240 IPR011043 -
Ahy11g2032 609 MobiDBLite consensus disorder prediction 429 444 - -
Ahy11g2032 609 MobiDBLite consensus disorder prediction 508 522 - -
Ahy11g2032 609 MobiDBLite consensus disorder prediction 499 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2032 Ahy-Chr11 129402377 129408391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2032 49 308 Acyl Lipid Metabolism Gene Families AT3G05420 29.670 5.10e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2032 - - aip:107634676 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2032 11 129402377 129408391 Ahy11g2032 11 129402377 129408391 ECH
Ahy11g2032 11 129402377 129408391 Ahy1g2887 1 109718502 109724886 hybridization