Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1879 ATGGCTAAGGTATCAATGTTGTTTTCCTTTCTTCTGGGTTTGGTGCTCCTTTCCCAAGCACATGGAAGTGGCGAGAAGATTGGGTTTTATGAACTTAGAAGAGGAGATTTTGAGATGAGAGTCACGAATTATGGTGCTACCGTTCTATCTGTTGTGCTTCCTGATAGAAATGGAAATTTGGCTGATGTTGTTCTTGGTTACGATTCTATTAAGTCTTATGCGAATGATACAACTTACTTTGGAGGGCTCATCGGACGAGTGGCAAATAGAATCGGAAATGCTGAATTCACTTTGGATGGCAAAACCTACAAATTGCCAGCTAATGATCATGGCAACACACTCCACGGCGGTTTCAAAGGGTTCAATAATGTTATTTGGACTGTAACATCCTACAAGAGAGACAGTCACATAACATTCCACTACAACAGTTATGACAATGAGCAAGGATTTCCTGGAAAACTTGAGGTGGATGTGACTTACATGTTGATGGATACAAACAAATTGGTTGTGAAAATGATTGCAAAAGCAATAGACAAAGACACACCGGTGAACTTAGCACAGCATACATACTGGAATATGAGAGGCCACAACACAGGCGACGTTCTTTCGCACAGAGTTCAAATCTTTGCATCCAAAATCACTCCGGTCAACGAAAAACTCATCCCTACCGGAAACCTTCAATCCGTGAAGGGCACTCCATACGACTTCCGTCGGCCAAAGGAAGTCGGAAAACAGATCGACGATCTGCCCGGTCTCTACGATATCAACTTCGCCGTAGACAGGAAAAGCAAGAAACACTTGAACAAAGTTGCCGTAGTGAGGGATCCAGTGTCCGGGAGGCAAATGGAGTTGTGGTCAAACCAGGTTGGAGTGCAGTTCTACACAAGTGGAATGTTGAATAACACCATTGGAGGCAAGGATGGTGCTGTTTACAAAAAGCATGCTGGTATTGCTTTGGAGACACAGGGGTTTCCTGATTCTGTTAATCATCCGAATTTTCCTTCTCAAATTGTTCGTCCTGGACAGATTTATCAACACTACATGGTTTATAGGTTCACTGCTTATTAA 1068 0.4288 MAKVSMLFSFLLGLVLLSQAHGSGEKIGFYELRRGDFEMRVTNYGATVLSVVLPDRNGNLADVVLGYDSIKSYANDTTYFGGLIGRVANRIGNAEFTLDGKTYKLPANDHGNTLHGGFKGFNNVIWTVTSYKRDSHITFHYNSYDNEQGFPGKLEVDVTYMLMDTNKLVVKMIAKAIDKDTPVNLAQHTYWNMRGHNTGDVLSHRVQIFASKITPVNEKLIPTGNLQSVKGTPYDFRRPKEVGKQIDDLPGLYDINFAVDRKSKKHLNKVAVVRDPVSGRQMELWSNQVGVQFYTSGMLNNTIGGKDGAVYKKHAGIALETQGFPDSVNHPNFPSQIVRPGQIYQHYMVYRFTAY* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1879 355 Pfam Aldose 1-epimerase 30 351 IPR008183 GO:0005975|GO:0016853
Ahy11g1879 355 PIRSF GALM 17 355 IPR015443 GO:0016853|GO:0019318
Ahy11g1879 355 Gene3D - 18 354 IPR014718 GO:0030246
Ahy11g1879 355 PANTHER ALDOSE-1-EPIMERASE 2 354 - -
Ahy11g1879 355 CDD galactose_mutarotase_like 30 352 - -
Ahy11g1879 355 PANTHER ALDOSE 1-EPIMERASE 2 354 - -
Ahy11g1879 355 SUPERFAMILY Galactose mutarotase-like 23 352 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1879 Ahy-Chr11 122566744 122569094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1879 11 355 Miscellaneous Gene Families AT3G47800 57.681 1.75e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1879 K01785 - gmx:102659620 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1879 11 122566744 122569094 Ahy20g2524 20 133037687 133043717 ECH
Ahy11g1879 11 122566744 122569094 Ahy11g1879 11 122566744 122569094 ECH
Ahy11g1879 11 122566744 122569094 Ahy1g2983 1 111624429 111626990 hybridization