Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1751 ATGGAGACCCTGACGGCCACACCCGACACGGGCACGACCGTGCGTGTCTCCAACATCCCCATATCCGCCACCGCCACCGACCTCGTCCACTTCCTCCAAGCCACACTGGGACCCTCCTCCGTCTTCGCCCTTGAGATCTTCACCGATCAGAACAACGCCACCTGGAACTCCCGCTCCTTCGGCCGCGTTCAGTTCGAGACACCCGACGCCAAAACCAAGGCCCTCTCCCTCTCCCACCACAACACCCTCGTCTTCAAATCCCACTTCCTCCACCTTTCCCACGCCCCCGACGATGTCGTCTTCCGCCCCTCCCTCCCCTCCCACCGCCTCGAAAACGGCACCCTCTATGCCGGCTTCATGGCCCGCGACGACCGCATGAGTGTGCTGCACACCTGGGAACGTGTCAGGGGCTGGCCCATGCCCGAGAGGAGGAAGATCGAGTTCTGGGTCCCACATGATGGACAGTGCTACAAGCTCGAGATTTGGTTCGAGGATATTCTGGAGGCCAATGGGTACTGTTTGGGTGGTGGTGACAAACTCAATGCCCTCCTCTTGAAGCTGAAATATGCACCAAAGATTTATCAGAAAAAATTTGGGTCAAATGTGTCGTCGAAGTTTAATGCTGCTAATGGTAGGTACCATTTCTGCAAGGAGGATTATGATTTTACTTGGGTTCGTACGACAGACTTCTCAGCTATGAAGGCACTTGGACATTCTACATCGTTTTGTTGGGAGATTGAGGAAGGACCATTCAATCAGGATATTTTTCGTAGTTTCCCGCTCTACAGAGAAATTCTGAAAGATCTAACTCTAGAGGAGGGGGAAGAGTATTGTTCTCCGGCAGAAATAGTTCCACTTGTAAACTGTCTTTCTACAGATACTAAGATACCGTATGAGACCCTTTTCCAATTGAATTCCCTCATTCATACCCAGAAAATCAGTCTTGCATCAGTAGATAGTGATTTCATTGACTTGCTAGGAAGTTTAGATGAAGAAACCAAAGCCCTGATTTTTCAGAAATTGCACAAGCTGAATTCCACTTGTTATGAACCTCAAAAATTTGTGAATACTCAATTACATGTGCTAAGTAGTAAGGGTAGAGGTCCTCATCCATCATCGCAGAAAAGGCTGATGGAGAATAACATAATGAGCTGTCATAGAGCCTTGATTACCCCAACAAAGATTTATTGTCTTGGTCCTGAGCTTGAAACCTCAAATCATGTGGTAAAGCATTTTTCTCAATTTGCTTCAGATTTCATGAGGATCACTTTTGTTGATGAGAACTGGGGTAAGCTTCCAGTTAATGCTGTATCAGCTAGTTTGCAAAAGGGAATCTTTTCAGAACCTTTTAGAACTAAAATATATGAGCGGATATTGACTATTCTTCGAGATGGGATTGTAATTGGTTTGAAAAAATTTGAGTTTCTGGCTTTCTCTGCGAGTCAACTCCGATCAAATTCAGTTTGGGTTTTTGCTTCGAGTGACAAGTTGAAAGCAGCAGATATTAGAGAATGGATGGGATGCTTCAACAATATTCGCAGCGTTTCTAAATGTGCAGCGAGGATGGGTCAGTTGTTCAGTTCATCAATGCAAACTTATGAAGTGCCCATTCAAGATGTGGAAATAATTCAAGATATTGAAGTTGAGACTGATGGTATAAAATACTGCTTCTCAGATGGTATTGGGAAAATTTCCCTCTCTTTTGCAAAAAAGGTTGCTGAAAAGCTAAAATTGGATAAGAATCAGATTCCATCAGCATTTCAAATTCGGTATGGTGGATACAAAGGTGTTCTTGCTGTTGATCGCCATTCCTTTAGGAAGTTATCGCTGCGTGGCAGTATGCTTAAATTTGAATCAAAAAACAAAATGCTTTGTGTCACTAATTGGAGTGATTCAATGCCTTGCTTTCTCAACCGAGAGGTTATATCTTTGCTGTCTACTTTAGGAGTAAAAGATGAGGCGTTTTTGGCAATGCAGCAGGAACAAGTGCATTTGCTAGGAAGGATGTTGACTGACAGTGATGCGGCTTTGGAAGTTTTGGAAACCCTAAGTGGAGCTGATTCTAAAAGCATTCTAGTGAAGATGTTGCATGGATTTTATAAGCCGAACAGTGAGCCTTACCTGGCGATGATGCTCAAAGCAAATTATGCATACCAGTTATCTGATTTGAGAACTAGATGCCGAATATTTGTTCCCAAGGGTCGTATCTTGTTAGGTTGCTTGGATGAAACTGGTCATTTGGATTATGGTCAAGTATTTGTCCGCATAACTGTGCCCAAAGCTAAGCAACAGTTTGAAGATGAAAGCTTGAGGAAAGTGGATGGTGATGACAGCACTTGTATACTAGTGGGGAAGGTGGTAGTAACAAAAAATCCTTGTCTTCACCCTGGAGACATCAGAGTCCTTGATGCTGTCTACAGTGAAGAACTAGAGGAAATGGGTTTGAGGGATTGCCTTGTATTTCCACAAAAAGGTCGTAGGCCTCATCCAAATGAATGCTCTGGGGGTGACCTTGATGGAGATTTATTTTTCTTAAGCTGGGAGAAAGATATGATCCCATCTCACACTGATTCTCCAATGGACTACACGGGGAGGAGGCCTCGTATAATGGACCACGATGTGACACTGGAGGAAATCCATAGGTTTTTTGTTGATTACATGATCAATGATACCTTGGGTGCTATCTCAACCGCCCATCTGGTTCACGCTGACCGTGAACCAGAAAAAGCCAGGAGTCACAAATGCCGGGAGTTGGCAGAACTTCATTCCATGGCTGTTGACTTTGCAAAGACTGGAGCACCTGCTGAAATGCCAAGAGTTCTGAAGCCAAGAGAGTATCCGGATTTCATGGAGAGGTTTGACAAGCCTATGTATATCTCCAAAGGGGTACTAGGAAAACTCTACCGTGACATAACTGAGTTGAAATTGCAAGTAACATCAAGCTCTGCCTGGTCAGAGAAACTTGCTGAGCAATACTATGATCACGAACTTGAAGTTGATGGTTTTGACGCCTACCTTGAAACCGCATCAAGTCACAAAGAAATGTATGCTCAGAAGATGACTAGTTTAATGAAATTCTATTGTGCAGAGACTGAAGATGAGCTGCTGACTGGAAACTTGATAAACCGCGCGTCATATTTGCAGCGTGATAACAGGAGATATGGAGATATGAAGGACCGGATCCTGATCTCGGTCAAGGATCTTCAGCGCGAAGCCAAAGAATGGTTTGAAACAAGCTGTGAACCCCGTGAATATCAACCTATGGCATCTGCATGGTATCATGTGACCTATCACCCAAAATATTACCAGGAAAGCTCCAACTTTTTGAGTTTTCCATGGATAGTTGGTGATATTTTACTGCATATAAAGGCTGTATATAGTGGAGTTAACAAATAG 3396 0.4411 METLTATPDTGTTVRVSNIPISATATDLVHFLQATLGPSSVFALEIFTDQNNATWNSRSFGRVQFETPDAKTKALSLSHHNTLVFKSHFLHLSHAPDDVVFRPSLPSHRLENGTLYAGFMARDDRMSVLHTWERVRGWPMPERRKIEFWVPHDGQCYKLEIWFEDILEANGYCLGGGDKLNALLLKLKYAPKIYQKKFGSNVSSKFNAANGRYHFCKEDYDFTWVRTTDFSAMKALGHSTSFCWEIEEGPFNQDIFRSFPLYREILKDLTLEEGEEYCSPAEIVPLVNCLSTDTKIPYETLFQLNSLIHTQKISLASVDSDFIDLLGSLDEETKALIFQKLHKLNSTCYEPQKFVNTQLHVLSSKGRGPHPSSQKRLMENNIMSCHRALITPTKIYCLGPELETSNHVVKHFSQFASDFMRITFVDENWGKLPVNAVSASLQKGIFSEPFRTKIYERILTILRDGIVIGLKKFEFLAFSASQLRSNSVWVFASSDKLKAADIREWMGCFNNIRSVSKCAARMGQLFSSSMQTYEVPIQDVEIIQDIEVETDGIKYCFSDGIGKISLSFAKKVAEKLKLDKNQIPSAFQIRYGGYKGVLAVDRHSFRKLSLRGSMLKFESKNKMLCVTNWSDSMPCFLNREVISLLSTLGVKDEAFLAMQQEQVHLLGRMLTDSDAALEVLETLSGADSKSILVKMLHGFYKPNSEPYLAMMLKANYAYQLSDLRTRCRIFVPKGRILLGCLDETGHLDYGQVFVRITVPKAKQQFEDESLRKVDGDDSTCILVGKVVVTKNPCLHPGDIRVLDAVYSEELEEMGLRDCLVFPQKGRRPHPNECSGGDLDGDLFFLSWEKDMIPSHTDSPMDYTGRRPRIMDHDVTLEEIHRFFVDYMINDTLGAISTAHLVHADREPEKARSHKCRELAELHSMAVDFAKTGAPAEMPRVLKPREYPDFMERFDKPMYISKGVLGKLYRDITELKLQVTSSSAWSEKLAEQYYDHELEVDGFDAYLETASSHKEMYAQKMTSLMKFYCAETEDELLTGNLINRASYLQRDNRRYGDMKDRILISVKDLQREAKEWFETSCEPREYQPMASAWYHVTYHPKYYQESSNFLSFPWIVGDILLHIKAVYSGVNK* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1751 1131 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 97 IPR000504 GO:0003723
Ahy11g1751 1131 Pfam RNA dependent RNA polymerase 390 971 IPR007855 GO:0003968
Ahy11g1751 1131 PANTHER RNA-DEPENDENT RNA POLYMERASE 10 1125 IPR007855 GO:0003968
Ahy11g1751 1131 Gene3D - 3 98 IPR012677 -
Ahy11g1751 1131 PANTHER RNA-DEPENDENT RNA POLYMERASE 2 10 1125 - -
Ahy11g1751 1131 CDD RRM_SF 14 83 - -
Ahy11g1751 1131 SUPERFAMILY RNA-binding domain, RBD 8 98 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1751 Ahy-Chr11 112096036 112100479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1751 K11699 - gmx:100808274 1714.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1751 11 112096036 112100479 Ahy11g1751 11 112096036 112100479 ECH
Ahy11g1751 11 112096036 112100479 Ahy1g1669 1 87215442 87219903 hybridization