Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g2015 ATGATCGAGGAGAGTAAGATGAAGACAAGAGCAGGAGACACGATGTTTGGTCAAATAGGATCCATAATTGCTTCATTGATGTTTATTTGGGCCATATTCGAGAAATTCTTCCCATTCCAAATCCGAAACCAAGCACAAAAACACACTCTAAGGTTGTTCTCTTTTGTTTACCCTTACATCCAAATCACATTCAATGAACTCATTGGTGATAGACACATGAGTAGAAGTGAGGCTTATACTTCCATACAGAATTACCTTTCTTCCAAGGCCACAACACAAGCTAAGAGACTCAAAGGTGACATAGGCAAGAACAACCAAACCCTTCTTCTTACCATGGATGACCATGAAGAAGTGTGTGATGAGTTCAATGGTGTTAAGCTTTGGTGGGTTTCTGGCAAAAACGTTGCCAAATCCCAAACACTTTCTCTACACAACAATTTAGCGGACGAGAAAAGGTACTACAAGCTTACCTTCCATAAACAACATAGAAACATGGTTTTAGGAACATATCTTAATCATGTTATGAGAGAAGGTAAAGCGGTTATGGTTAGAAATAGGCAGAGGAAGCTTTATACTAATAGCGGTTCGTTTTGGAACCATGTTGTGTTTGAGCATCCGGCAACGTTTGAAAGCGTGGCGATGGACGAGGAACTGAAGAAAAGGATCATTGATGATTTGGTAACGTTTAGTAAGTCAAGGGAGTTTTATGCAAGAATTGGAAGGGCCTGGAAGAGAGGGTATTTACTTTTTGGTCCTCCGGGGACGGGGAAGTCGACGATGATCGCGGCGATGGCGAATCTGTTGGGATATGATTTGTATGATTTGGAACTGACTGCTGTGAAGGACAACACAGAGTTGCGGAAGCTGTTGATTGAGACATCAAGCAAGTCCATTATTGTGATTGAGGACATAGATTGTTCACTTGATCTAACTGGTCAGAGGAGGAAGAAAATGGAAAGAGCGAAGGAAGATGAAGAAGAAGAAGAAGAAGAAGATCAACGGAAGAAGAAGCAGAGTGGGTTGAAAGAAAGAGATGTTAAGAGCAGCCAGGTTACACTCTCAGGGCTTCTGAACTTCATTGATGGATTGTGGTCTGCATGTGGAGGAGAGAGGCTAATAGTTTTCACTACAAACTATGTTGAGAAATTGGATCCAGCATTGGTGAGAAGAGGGAGAATGGACATGCACATTGAATTATCATACTGTGGATTTGAGGCATTCAAGTTGCTGGCCAAGAATTACCTTAAAATTGAATCACACCATTTGTTTTCAACAATTTCTGACTTGCTCAAACACTCTCAAATCACACCAGCTGATGTTGCTGAGCACTTTATGCCCAAACCTGCTTTTGGGAACAATCCAGACCTTTATTTGAAGGCTTTGATTCAATCACTTGAAGAAACCAACTTCAAACAGAACAAACATGCAAGCAATACTTAA 1440 0.4097 MIEESKMKTRAGDTMFGQIGSIIASLMFIWAIFEKFFPFQIRNQAQKHTLRLFSFVYPYIQITFNELIGDRHMSRSEAYTSIQNYLSSKATTQAKRLKGDIGKNNQTLLLTMDDHEEVCDEFNGVKLWWVSGKNVAKSQTLSLHNNLADEKRYYKLTFHKQHRNMVLGTYLNHVMREGKAVMVRNRQRKLYTNSGSFWNHVVFEHPATFESVAMDEELKKRIIDDLVTFSKSREFYARIGRAWKRGYLLFGPPGTGKSTMIAAMANLLGYDLYDLELTAVKDNTELRKLLIETSSKSIIVIEDIDCSLDLTGQRRKKMERAKEDEEEEEEEDQRKKKQSGLKERDVKSSQVTLSGLLNFIDGLWSACGGERLIVFTTNYVEKLDPALVRRGRMDMHIELSYCGFEAFKLLAKNYLKIESHHLFSTISDLLKHSQITPADVAEHFMPKPAFGNNPDLYLKALIQSLEETNFKQNKHASNT* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g2015 479 CDD AAA 233 401 - -
Ahy10g2015 479 Gene3D - 398 469 - -
Ahy10g2015 479 Gene3D - 199 397 IPR027417 -
Ahy10g2015 479 MobiDBLite consensus disorder prediction 319 343 - -
Ahy10g2015 479 Pfam ATPase family associated with various cellular activities (AAA) 248 400 IPR003959 GO:0005524|GO:0016887
Ahy10g2015 479 SMART AAA_5 243 403 IPR003593 -
Ahy10g2015 479 Pfam Domain associated at C-terminal with AAA 37 131 IPR025753 -
Ahy10g2015 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 446 IPR027417 -
Ahy10g2015 479 ProSitePatterns AAA-protein family signature. 371 390 IPR003960 GO:0005524|GO:0016887
Ahy10g2015 479 Coils Coil 308 338 - -
Ahy10g2015 479 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 13 471 - -
Ahy10g2015 479 PANTHER BCS1 AAA-TYPE ATPASE 13 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g2015 Ahy-Chr10 107079760 107082439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g2015 208 394 Miscellaneous Gene Families AT5G58870 29.231 8.94e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g2015 K08900 - rcu:8275997 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2500 20 132172112 132174776 Ahy10g2015 10 107079760 107082439 hybridization