Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1958 ATGTTGATTCAGATTCCTCGCTTCACAAACTCCCTCAGAAACCCCTTCGATGTCGACCAAGCCTACCTCCATCGCAAAACCCTACTCCACAATCAAAATCCTCGCAATTCTGCGAACTCGCTTGATGAATCGGTACTTGCACGGAAGATCGTGGTTGGATGGGAAGAAGCTTCGTGGGAAGTGAGGCAGGCGTACAAGCAGTTTATAGGAGCAGTGGTGGAGCTGACTGATGGCGAAATGCGCTCCGAGGAGTTCCAGGAAGTGGCGCTGACTGTGTACCGCCATTTCGGCAGGCCGATGGAGGATGAGGATTATCTTGATAGAATTATTGCGGATAAGAAGTTAGAATTGCAAAAGCTTGTTGGTCATGCTATTGCCGATACAAAGTTGAGGCATGTTGCGTCTCTAGCACAGAATCTTCTGAACTTGCAGCCTAGCAATAAATGCCCTGCCTTGTCTTCGGAAAGAAATCTGGATGATAATGAGGATTTGGAATTCGGGGCTGATTTTGTTTTCCAAGCACCAACGCGTTTTTTGGTTGATGTATCATTTGACAATGTAGATATGATGGATTTCAGGAGCACACTTCCTGTATCATTTCATGAAGAACAATATGCTCTTACTATTCCAACAGATCAGTCTGTTGATGCAGAAAAGTTCAACTTGACTTGGTTAAGAGAAGCATGTGATAAAATAGCTAGGAATTCTAATTCTCAGATATCCCGAGATGAATTAGCAATGGCCATCTGTAGGGTTCTTAATTCAGAAAAGCCTGGTGAAGAGATAGCAGGAGATCTGTTAGATCTGGTTGGTGATAGTGCATTTGAAACTGTGCAAAATCTTCTATTGCATCGAAAGGAGATTGTTGATTCAATTAATCATGGCTTGTCAGTATTGAAGTCTGATAAAAATGCTCCAAATTCTCAGTCTCGTATGCCTAGTTATGGGACACAGGTTATCGTTCAAACAGAGTCAGAAAAGCAAATTGACAAGCTTCGGCGCAAGGAGGAAAAGCGAAACAGAAGGGGAATAGAATATGGCGGTGATGGTGACTTGTCTGCATCTGACTTCTCGTCTTTACTACAAGCAACTGAGAGGAAGAATTTATTTGATGATTTGATTGGTTCTGGGGATAAGTCCCAGTCAATAGCCGTAACTGCTCTTCCTGAAGGAACTGCGAGAAAGCATTTTAAAGGGTATGAAGAGGTTACCATTCCTCCTAAACCAACAGCGCCAATGAAACCTGGAGAAAAGCTGATTGAGATAAGGGAGTTAGATGACTTTGCTCAAGCTGCATTCCGTGGTTACAAAACGCTAAACCGTATCCAGAGCAGAATATTTCAAACTGTTTATGGCACTAATGAGAATATACTGGTGTGTGCTCCCACAGGAGCTGGGAAAACTAACATAGCCATGATTTCCATTCTACATGAGATCGGACAGCATTTTAGGGATGGTTACTTGCACAAAGATGAATTTAAGATAGTTTATGTGGCTCCAATGAAGGCTTTGGCTGCGGAAGTCACATCAGCATTTAGCCAACGTCTATCTCCTTTGAATATGGTTGTCAGGGAGCTAACTGGAGATATGCAGCTTTCTAAGAATGAACTTGAAGAAACTCAGATGATAGTGACAACCCCTGAGAAATGGGATGTCATTACTCGCAAGAGTAGTGACATGTCACTCTCTATGCTGGCAAAGCTCTTGATCATCGATGAAGTGCACCTACTCAATGATGATAGAGGTCCTGTAATAGAGGCCCTAGTTGCTAGGACCCTACGGCAGGTGGAGTCAACTCAAACAATGATACGCATTGTGGGCCTTTCTGCCACTCTTCCCAATTACCTGGAGGTTGCTCAATTTCTTAGAGTAAATGCAGATACAGGTCTTTTCTTCTTTGATTCTAGTTATCGTCCAGTGCCTCTTGCACAACAGTATATTGGAATTAGTGAGCCAAATTTCACAGCTCGAAATGAATTGTTGAATGATATATGTTATAAGAAGGTTGTTGATTCTATCAGGCAAGGTCATCAGGCAATGGTATTTGTCCATTCACGGAAAGACACTACAAAGACTGCTGAGAAGCTGGTTGAGCTTGCTCGGAGGAGTGAGGATTTGGAACTCTTTGGAAATGATACTCATCCACAGTTTAACTTAATGAAGAAGGAAGTAATTAAATCCAGAAACAGAAATCTTGTTGAACTTTTTGAATATGGCATGGGTGTTCATCATGCTGGGATGTTACGTGCAGATAGAGGGCTTACTGAACGGCTTTTCTCTGAGGGTCTCCTGAAGGTACTTGTCTGTACAGCAACATTGGCATGGGGTGTCAATCTTCCTGCTCACACAGTTGTCATTAAGGGTACCCAATTGTATGATCCAAAAGCTGGTGGGTGGCGAGATCTGGGTATGCTTGATGTTATGCAGATATTTGGCCGAGCTGGCAGACCTCAGTTTGACAAAAGTGGTGAAGGTATCATAATTACATCTCATGATAAACTAGCTTATTATCTGCGACTGCTGACAAGTCAACTCCCTATAGAAAGCCAGTTCATTAGCTCCTTGAAAGATAATTTGAATGCAGAGGTGGCATTGGGTACTGTAACTAATGTCAAAGAAGCCTGTGCATGGCTTGGCTATACCTATCTCTTCATACGGATGAGGATGAATCCTTTGGCATATGGTATAGGATGGGATGAGGTGATGGCAGATCCTGGCTTAACGTCTAAGCAAAGATCTTTTGTAATTGATGCTGCACGTGCACTCGATAAAGCTAAAATGATGCGGTTTGATGAGAAAAGTGGCAATTTTTACTGTACTGAGCTTGGTCGCATTGCAAGCCATTTTTACATACAATATTCCAGTGTTGAAACATATAACGAAATGTTGAGACGCCACATGAGTGACAGTGAGGTGATTAACATGGTTGCACATTCATCTGAATTTGAGAATATTGTTGTTCGAGAAGAAGAACAGAATGAGCTAGAGATGTTGGTTCGCTCACAATGTCCATTAGAAGTTAGGGGTGGTCCTTCCAATAAACATGGAAAGATATCCATTTTGATTCAGTTGTATATATCTCGAGGGTCTATAGATTCTTTTTCTTTGGTATCTGATGCTGCATACATAAGTGCAAGCTTAGCTCGTATAATGCGGGCTTTATTTGAGATTTGTCTGCGAAGGGGCTGGTGTGAAATGTCTTTGTTTATGTTGGAATATTGCAAAGCTGTGGATCGCCAAGTTTGGCCACACCAACATCCTCTTAGACAGTTTGATAAGGACATTTCTGGAGAGATATTGCGGAAGCTCGAAGAACGTGGGGCTGACCTAGATCGCCTGTTGGAGATGGAGGAAAAAGACATTGGGGCGTTAATTCGTTATGCACCTGGAGGAAAATTGGTCAAGCAATACCTGGGGTATTTTCCATCAATTCAGTTATCAGCGACAGTCAGTCCGATAACTAGAACTGTTCTGAAGGTTGATTTGGTGATAATGCCTGTTTTCATTTGGAAAGATCGTTTTCATGGTACTGCTCAACGCTGGTGGATTTTGGTAGAGGACTCTGAGAATGATCACATTTACCACTCAGAACTCTTTACTCTGACAAAGCGGATGGCTAAAGGGGAACCTTATAAACTTTCCTTCACTGTGCCCATATTTGAACCACACCCGCCACAGTATTACATTCATGCTATTTCTGATTCTTGGCTTCAAGCAGAAACATTCTACACTATTACTTTTCATAATTTACCATTGCCAGAGGCTAGGACTTCTCACACTGAACTCCTTGATTTAAAACCTCTTCCCGTGTCTTCCCTAGGCAATGTTGCTTATGAAGCGTTATATAGATTTTCACATTTTAATCCTATACAGACACAGATTTTTCATGTCTTGTATCACACGGACAATAATGTTCTGTTAGGAGCTCCAACTGGAAGTGGTAAAACTATATCTGCTGAGCTTGCTATGCTTCATCTTTTCAACACGCAGCCTGATATGAAGGTTATTTATATAGCACCTTTGAAGGCTATTGTCAGGGAAAGAATGGGTGATTGGCAAAGGCGTCTTGTCTCTCAGCTAGGGAAAAAGATGGTTGAAATGACGGGAGACTATACACCAGATTTGATGGCCCTTTTGTCTGCAGATATCATCATATCTACCCCTGAAAAATGGGATGGTATCAGTCGTAATTGGCATACACGCAGCTATGTCACAAAGGTTGGACTCATGATATTGGATGAGATTCACTTATTGGGAGCTGATCGTGGACCCATACTTGAGGTTATTGTTTCTAGGATGAGATACATATCATCACAAACAGAGCGAGCAATAAGATTTGTTGGCCTCTCTACAGCTCTAGCAAATGCTGGTGATCTAGCTGATTGGTTAGGCGTTGAGGAGACTGGCCTCTTCAATTTCAAGCCAAGTGTGAGACCTGTACCTCTGGAGGTTCATATCCAGGGCTATCCTGGAAAGTATTATTGCCCAAGGATGAACAGTATGAATAAACCAGCGTATGCAGCAATATGCACACATTCACCTGCTAAACCTGTTCTTATATTTGTCTCTTCACGACGCCAGACAAGGCTGACTGCACTGGACCTAATTCAGTTTGCTGCCTCAGACGAGCATCCAAGGCAGTTCCTTGATATGCCAGAAGATGCACTGCAGATGGTTCTGTCTCAAGTCTCTGACCAAAACCTGAGGCATACTTTACAATTTGGTATTGGGTTACACCATGCAGGCCTGAATGACAAAGACAGATCATTGGTTGAGGAACTTTTTGCAAACAACAAGATTCAGATACTGGTTTGTACCAGCACATTGGCTTGGGGTGTGAATCTTCCAGCTCATCTAGTGATTATCAAGGGTACAGAATACTATGATGGAAAATCAAAGAGGTATGTAGATTTTCCAATCACTGATATCTTGCAAATGATGGGTCGTGCTGGAAGGCCTCAGTTTGATCAGCATGGGAAAGCAGTGATTCTTGTTCATGAACCAAAGAAGAGCTTCTATAAAAAGTTCTTGTATGAACCTTTTCCAGTTGAAAGTAGTCTGAGGGAGCACCTGCATGATCACCTCAATGCTGAAATTATTTCTGGAACCATTTGCAATAAACAAGATGCAGTGCACTACCTTACCTGGACTTACTTATTCCGTAGACTGATGGTTAATCCTGCTTACTATGGATTGGAGAATGCCGACCCTGAATTTATTAGTTCATATCTGTCTAGTCTAGTACAGAGTACATTTGAGGACTTGGAAGACAGTGGATGCATAAAAATGAATGAAGACACTGTAGAATCAATGATGTTGGGTTCAATAGCATCTCAGTATTACCTAAGCTACATGACAGTATCAATGTTTGGTTCAAACATAGGTCCTGATACATCACTTGAAGTGTTTTTGCACGTCTTATCTGCTGCTTCCGAATTTGATGAACTCCCTGTGCGTCATAATGAGGAAAAATACAATGAAGGACTGTCTCAGAAAGTTAAATATCCAGTGGATAACAACCGTTTGGATGACCCCCATGTCAAAGCAAATCTTCTATTTCAGGCTCATTTCTCTCAGTTGGACTTACCAATTAGTGATTATGTCACGGACTTGAAGTCAGTATTAGATCAGAGTATACGCATAATTCAGGCCATGATTGATATATGTGCAAACAGTGGTTGGCTTTCAAGCTCACTCACTTGCATGCATCTTCTGCAAATGGTCATGCAGGGGCTGTGGTTTGAAAAGGACTCTTCTTTATGGATGCTGCCATGCATGAATGCTGATCTAATGCAATCCCTTAGCAGAAGTGGAATTTCCAGTGTACAGGAATTACTAGATATTCCCAAGGCATCCTTGCAAAATGTAACAGGAAGTTTCCCGGCTTCAAGATTGTACCAGGACCTACAGCACTTCCCTCGTGTTAAAATGAAGTTAAAGCTTCAGAAGAAGGAAACTAATGGTGAGAGCTCCGATGCATTGTACATCAGATTGGAGAAGTCGAATTCTAGACGACACTCCTCTCAAGCCTTTGTACCTCGATTTCCAAAGATAAAAGAAGAGCAGTGGTGGTTGGTTCTTGGTAATACCTCTACATCTGCTGAGTTATATGCATTGAAGCGAGTGTCTTTTTCTGATCAGTTGGTTACCTTGATGAAGCTGCCTCATACACCATCCAACCTTAAGGGTATGAAACTCATATTAGTCTCAGATTGTTACATTGGATTTGAACAAGAACACTCCATTGAAGGACTTATTGGAGGCCGGCATTAG 6273 0.4199 MLIQIPRFTNSLRNPFDVDQAYLHRKTLLHNQNPRNSANSLDESVLARKIVVGWEEASWEVRQAYKQFIGAVVELTDGEMRSEEFQEVALTVYRHFGRPMEDEDYLDRIIADKKLELQKLVGHAIADTKLRHVASLAQNLLNLQPSNKCPALSSERNLDDNEDLEFGADFVFQAPTRFLVDVSFDNVDMMDFRSTLPVSFHEEQYALTIPTDQSVDAEKFNLTWLREACDKIARNSNSQISRDELAMAICRVLNSEKPGEEIAGDLLDLVGDSAFETVQNLLLHRKEIVDSINHGLSVLKSDKNAPNSQSRMPSYGTQVIVQTESEKQIDKLRRKEEKRNRRGIEYGGDGDLSASDFSSLLQATERKNLFDDLIGSGDKSQSIAVTALPEGTARKHFKGYEEVTIPPKPTAPMKPGEKLIEIRELDDFAQAAFRGYKTLNRIQSRIFQTVYGTNENILVCAPTGAGKTNIAMISILHEIGQHFRDGYLHKDEFKIVYVAPMKALAAEVTSAFSQRLSPLNMVVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLAKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNADTGLFFFDSSYRPVPLAQQYIGISEPNFTARNELLNDICYKKVVDSIRQGHQAMVFVHSRKDTTKTAEKLVELARRSEDLELFGNDTHPQFNLMKKEVIKSRNRNLVELFEYGMGVHHAGMLRADRGLTERLFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRMNPLAYGIGWDEVMADPGLTSKQRSFVIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMSDSEVINMVAHSSEFENIVVREEEQNELEMLVRSQCPLEVRGGPSNKHGKISILIQLYISRGSIDSFSLVSDAAYISASLARIMRALFEICLRRGWCEMSLFMLEYCKAVDRQVWPHQHPLRQFDKDISGEILRKLEERGADLDRLLEMEEKDIGALIRYAPGGKLVKQYLGYFPSIQLSATVSPITRTVLKVDLVIMPVFIWKDRFHGTAQRWWILVEDSENDHIYHSELFTLTKRMAKGEPYKLSFTVPIFEPHPPQYYIHAISDSWLQAETFYTITFHNLPLPEARTSHTELLDLKPLPVSSLGNVAYEALYRFSHFNPIQTQIFHVLYHTDNNVLLGAPTGSGKTISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMGDWQRRLVSQLGKKMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHTRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERAIRFVGLSTALANAGDLADWLGVEETGLFNFKPSVRPVPLEVHIQGYPGKYYCPRMNSMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLDMPEDALQMVLSQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQILVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLREHLHDHLNAEIISGTICNKQDAVHYLTWTYLFRRLMVNPAYYGLENADPEFISSYLSSLVQSTFEDLEDSGCIKMNEDTVESMMLGSIASQYYLSYMTVSMFGSNIGPDTSLEVFLHVLSAASEFDELPVRHNEEKYNEGLSQKVKYPVDNNRLDDPHVKANLLFQAHFSQLDLPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSLTCMHLLQMVMQGLWFEKDSSLWMLPCMNADLMQSLSRSGISSVQELLDIPKASLQNVTGSFPASRLYQDLQHFPRVKMKLKLQKKETNGESSDALYIRLEKSNSRRHSSQAFVPRFPKIKEEQWWLVLGNTSTSAELYALKRVSFSDQLVTLMKLPHTPSNLKGMKLILVSDCYIGFEQEHSIEGLIGGRH* 2091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1958 2090 Gene3D - 848 938 IPR036388 -
Ahy10g1958 2090 Pfam DEAD/DEAH box helicase 1289 1453 IPR011545 GO:0003676|GO:0005524
Ahy10g1958 2090 Pfam Helicase conserved C-terminal domain 671 816 IPR001650 -
Ahy10g1958 2090 Pfam Helicase conserved C-terminal domain 1567 1652 IPR001650 -
Ahy10g1958 2090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1173 1471 IPR027417 -
Ahy10g1958 2090 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1296 1471 IPR014001 -
Ahy10g1958 2090 Gene3D - 1252 1478 IPR027417 -
Ahy10g1958 2090 SUPERFAMILY E set domains 1992 2082 IPR014756 -
Ahy10g1958 2090 CDD SF2_C_Ski2 638 829 - -
Ahy10g1958 2090 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 665 863 IPR001650 -
Ahy10g1958 2090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 846 IPR027417 -
Ahy10g1958 2090 Pfam DEAD/DEAH box helicase 441 614 IPR011545 GO:0003676|GO:0005524
Ahy10g1958 2090 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1502 1711 IPR001650 -
Ahy10g1958 2090 PIRSF BRR2 13 2088 - -
Ahy10g1958 2090 Gene3D - 1684 1777 IPR036388 -
Ahy10g1958 2090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1473 1682 IPR027417 -
Ahy10g1958 2090 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3 428 469 - -
Ahy10g1958 2090 SUPERFAMILY Sec63 N-terminal domain-like 967 1142 - -
Ahy10g1958 2090 SMART ultradead3 435 646 IPR014001 -
Ahy10g1958 2090 SMART ultradead3 1283 1487 IPR014001 -
Ahy10g1958 2090 PANTHER SEC63 DOMAIN-CONTAINING 428 469 - -
Ahy10g1958 2090 SUPERFAMILY "Winged helix" DNA-binding domain 846 951 IPR036390 -
Ahy10g1958 2090 SMART AAA_5 453 634 IPR003593 -
Ahy10g1958 2090 SMART AAA_5 1301 1534 IPR003593 -
Ahy10g1958 2090 Gene3D C2 domain 1141 1250 IPR035892 -
Ahy10g1958 2090 CDD SF2_C_Ski2 1478 1666 - -
Ahy10g1958 2090 Gene3D - 639 841 IPR027417 -
Ahy10g1958 2090 Gene3D - 427 638 IPR027417 -
Ahy10g1958 2090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 623 IPR027417 -
Ahy10g1958 2090 SUPERFAMILY Sec63 N-terminal domain-like 1803 1958 - -
Ahy10g1958 2090 SMART helicmild6 726 818 IPR001650 -
Ahy10g1958 2090 SMART helicmild6 1566 1654 IPR001650 -
Ahy10g1958 2090 Pfam Sec63 Brl domain 1771 2082 IPR004179 -
Ahy10g1958 2090 Gene3D - 1084 1138 - -
Ahy10g1958 2090 Gene3D C2 domain 1973 2084 IPR035892 -
Ahy10g1958 2090 CDD DEXHc_ASCC3_1 438 634 - -
Ahy10g1958 2090 CDD DEXHc_ASCC3_2 1286 1474 - -
Ahy10g1958 2090 Gene3D - 940 1082 - -
Ahy10g1958 2090 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3 469 2083 - -
Ahy10g1958 2090 Gene3D - 1778 1914 - -
Ahy10g1958 2090 SMART Sec63_2 1770 2084 IPR004179 -
Ahy10g1958 2090 SMART Sec63_2 939 1247 IPR004179 -
Ahy10g1958 2090 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 448 630 IPR014001 -
Ahy10g1958 2090 SUPERFAMILY "Winged helix" DNA-binding domain 1682 1782 IPR036390 -
Ahy10g1958 2090 Gene3D - 1479 1683 IPR027417 -
Ahy10g1958 2090 Coils Coil 1100 1120 - -
Ahy10g1958 2090 Pfam Sec63 Brl domain 939 1245 IPR004179 -
Ahy10g1958 2090 PANTHER SEC63 DOMAIN-CONTAINING 469 2083 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1958 Ahy-Chr10 105713638 105736198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1958 K18663 - gmx:100811503 3761.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2440 20 130156743 130179781 Ahy10g1958 10 105713638 105736198 hybridization