Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1702 ATGAACTTGTCCAAGAAAGTATCCCAAACGGATGCAAAGCTAAGCAGCCCAAACAAGGCAACCACTTTGAATCCAAATGCAGCAGAGTTTGTTCCTTTTTCTCTCAGAACATCGTTCTCTGGAACTGCCAGCTCGGTTGATGCAACAGCAAGGCTTGCCAATGCTGGGGCTCTTGGAAAAGCAGTTTTAGATCGGTCAGAATCATCCATTTCAAACAATTCCGATGATGAGGTTCACCAATACTGGCGATGTCAGCTCCCTGACGATATAACCCCTGATTTCAAGGTCGCAGGAGAAGATGTATCCCAAGATGTTAATGACCTTTCTTTAGCTGGCTTATCTATGCATGATGACATTGAAGGCTTGAGGTTTGCCTCATCTAAAGGAAGTAGATATATATTAAATGAGCAGGAGGAATTATCTCAGCAGCACATTAATGGCAACAGTTTTACTGATAGATTAAGGTTTTCCAATTCTAGCTTTAGGGAGGACCCATCTTCAGCAAGCTTTCTGAACACTTCAACAAATCCATGGGATAGGCCAATTGGGAATGCCAACCAGTTTGTTAGCAGTGGTCAAGAGGGGCTTACTTATGATGACAACTCAAGACATGGATTTTTAAATGACATCTTTTCTGAGAATGCAATCGTGAATGATACTAATTTGAACCCCTTGGAGTTTCTGGCTTCTCTGTTCCCTGGTTTTGCAGCAGAAAGCCTTGCGGAAGTTTACTTTGCCAATGGATGTGATTTGCATATGACCATAGAGATGCTCACTCAGTTAGAGCTTCAAGTTGATGGTAGTTTTCATCAGAATCTGAACTCAAAGACTCTGTCAGCTCCCAATCTCAGTGCGATGGATTTTCCTGCACTTACTTCACCAGATGGTCAGACAGCTTCTGTAAAATATTCTGTAGATAATGTCCAGCAAAGTGGCAACCCTTACCGATCATCAGACAAAGACATTCTGTCTTTCAAAACTAGCTCTTCAATTCCGACTAGAGGTGCTATTGACTTTGCTTCAGCTGTGAGGAAGCTGGCTTCTCAGGACTCTGGTATTTGGAAGTATGATAAAAGCGGTTCTGGTGATGCTGCCATTGGGTCAAGTAGGACATCTCATGTTTTGGCTGGCTACGATGGTGGACTGGGTAGAGCCAGCTTCAGTGACCGGTTACAGACTCGTGGTTCAACTCGGGCAGCACCTGTTTGGGTTGATACTGGTGACGCAGTTGCAAATATGTACTCGGAGCTGAGGGAGGAGGCTCGTGATCATGCACGCTTACGTAACGCATATTTTGAGCAGGCACGGCAAGCCTATCTTATTGGCAATAAAGCCCTAGCAAAGGAACTTAGTGCTAAAGGGCAAGTGCACAACATGCATATGAAAGCAGCTCATGGAAAAGCTCAGGAATCTATTTATCGCCAGAGGAATCCAGTTGCTCCAGAGATGCAGGGGAATGGAAGAGGGCAAGAGAGGATGATCGACCTACATGGACTGCATGTGAGTGAAGCCATTCATGTGCTAAAACATGAGCTTAGTGTGCTGAAAAACACGGCCAGAGCTGCCGATCAGCCTCTGCAGGTCTATATTTGTGTGGGGACAGGTCATCATACGAGAGGTTCCCGCACTCCTGCTAGACTTCCGATAGCTGTACAGCGTTTTCTACTCGAAGAAGGTCTTGACTTCACAGAACCTCAGCCAGGCCTACTTCGTGTTGTGATATTTCCAATGATGCGATCCACTTCCATTCTCTTGCTCTCCAGACCTTCCCTTTTCCCTTCTTCCTTCTCATTTTCCACCACCTCCCTGTCTCAATGGTTTTCCTTTCTCCGCCACGCCATCGCCACCTCCGACCTCCTCCTCGGAAAACGTGGCCACGCCCTCATCATAACCTCCGGCCACCACCATGACCCTTTCCTCGTCAACAACCTCATCACCATGTACGGCAAATGCGGCTCCCTCTCCTGCGCTCGCCACCTGTTCGACGTAATTCCCCACAGAGACCTTGTCACCTGGAATGCCATTCTCTCTGCATACGCCCAAGCCGGTGATGCTGACATTGTCAACGCTCATGAGGGTTTTCGCCTTTTCCGTGTTCTCCGCGAGTCCTTTGTGTTAACCACTCGTCATACTCTGGCCCCTGTGTTCAAGTTATGCCTCCTTTCTGGGTGTGAATGGGCTTCTCAGGTGCTTCATGGCTATGCGGTTAAGATTGGATTGGAATGGGATGTGTTTGTGGCTGGGGCATTGGTCAATATATATGCTAAATTTGGGAGGATCAGAGATGCCCGTGTTCTGTTTGAAGGGATGCCCGTGAGGGATGTGGTCTTGTGGAACGTCATGATCAAGGCTTATGTTGAAATGGGTCTTCAGGATGAAGCTTTGTTTCTCTTCTCGGCGTTTCACAGGAGTGGCCTGTGTCCTGATGATGTTACTGTCCGGAGTGTTCTTATGGGTGTTAGTAGAACTGGTTTTGAATTGCAGTTGAAGCAGGTTCGAGCTTATGCTACAAAGTTGTTCCTTCTGGATCATGATTGGGAGGTTGTCATATGGAATAAGACACTTAGTGACTATCTTCAAGCTGGAGAGACTACGGAGGCTATTGAATGCTTCATGGATATGATCAAACTGCGGGTAGCATATGACAACATGACATTACTCGTGATGCTATCTGTGGTTGCAAGTGAAAAGAATATCAATATGGGAAAACAGATTCACTGTGTTGTTGTGAAAATGGAGTCTGATCGTGTTGTATCAGTTGCAAACAGTCTTCTTAATATGTACATGAAGGCAGGTTCTATTGATTATGCGAAAATCGTGTTTAGTCAAATGAAAGAAAAGGATTTAATATCATGGAACACAATTATATCTGGTTGTACGCTGGGTGGTTCAGTGGAGTTGTCCATAAGCTTCTTTGTTAATTTACTACGCAGTTGCCTATTGCCGGACCAATTCACAATTGCAAGTGTTTTGAGGGCTTGCTCTTCTCTTAAAGAGGGCGTCTATTTCAGTAGACAAATTCATACTTATGCAATAAAAGCTGGTATCATCTATGATTCGTTTGTTTCAACAGCTTTAATTGATGCCTATTCCAAGAGTGGAAAGATGGAAGAGGCAGAACTTCTTTTTAGAATCCATGATGGATTTGATTTGGCTTCTTGGAACGCTATGATGCATGGGTACATAGTGAGTAAGTGCTATCACAAAGCATTGGAGCTTTTCATTCAAATGCTTGGAAGTGGTGAGCAGGGAGATCAGATTACTCTGGCAAATGCAGCTAAAGCTGCTGGATGCTTGGTGGGGCTTGAACAAGGGAAGCAGCTTCACGCCATTGCCATAAAAAGGATATTTAATTTAGATTTGTTTGTTATAAGCGGGATTCTGGACATGTATCTAAAATGTGGAGAGATGCAAAGCGCATGCAAAGTTTTCAGTAAGATCCCTTCACCTGATGATGTTGCATGGACAACTATGATATCAGGATGCGTGGATAATGGATATGAGGAGCATGCTCTTTTTACATATCATCAGATGAGACTTGCCGGTGTGCAACCTGACGAGTATACCTTTGCCACCCTTGTCAAGGCTAGCTCTCTTCTAACAGCATTGGAACAAGGGAGACAGATTCATGCTAATGTTATCAAGTTGAACTGTGCTTTAGATCCTTTTGTTATGACCTCGCTTGTTGACATGTATGCCAAGTGTGGGAACATAGAAGATGCCTATAGATTGTTCAAAAAAATGAACATGAAGAGCATCGCCTCGTGGAATGCTATGATAGTTGGATTAGCTCAACACGGAAATGCAAAGGAGGCCCTCAACCTTTTCAAAGATATGAAGTCTAAGGATGAAATGCCTGACAGAGTTACCTTTATAGGAGTCCTTTCTGCTTGTAGCCATTCTGGTTTGGTTTCTGAAGCATATGAAAATTTCTATTCTATGCAAAGAGACCACAGAATTGAACCCGAGATTGAGCATTATTCCTGTCTTGTTGATGCCCTTAGCCGTGCAGGGCGCATACAGGAAGCTGAAAAGGTTATATCATCGATGCCCTTTGAAGCTTCTGCTTCAATGTACAGGACTCTCCTAAATGCTTGTAGGGTTCAAGGAGACAAGGTGAAGGGAAAACATGTTGCCGAGACGCTTTTGACCTTGGAGCCGTCTGATTCAGCAGCTTATGTTCTTTTATCCAATATATATAGAGCTGCTAATCAATGGGAAAGTGCAGTGAGTGCTAGAAATATGATGAGAAGGGTAAATGTAAAGAAGGATCCAGGCTTTAGTTGGATAGATATAAAGAACAAGGTTCATTTGTTTGTAGCAGGAGATAGATCACATGAAGAAGCTGATTTGATATACAATAAGGTGGATCATATTATGAAAAGGATTAAGGAAGAAGGATATGTCCCTGATACAGATTTTGCACTTGTTGATATTGAAGAAGAAGAAAAGGAGAGTGCTCTTTATTATCACAGTGAGAAGCTAGCAATAGCTTATGGTATCGTAAGAACACCACCATCCATCCCATTAAGGGTAATTAAGAACCTTAGGGTGTGTGGAGATTGCCATAATGCAATCAAATATATGTCAAAGGCCTTTCAACGAGATATTGTTGTGAGAGATGCAAACCGATTTCATCATTTCAGGAGTGGAATCTGCTCTTGTGGTGATTATTGGTGA 4680 0.4376 MNLSKKVSQTDAKLSSPNKATTLNPNAAEFVPFSLRTSFSGTASSVDATARLANAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVAGEDVSQDVNDLSLAGLSMHDDIEGLRFASSKGSRYILNEQEELSQQHINGNSFTDRLRFSNSSFREDPSSASFLNTSTNPWDRPIGNANQFVSSGQEGLTYDDNSRHGFLNDIFSENAIVNDTNLNPLEFLASLFPGFAAESLAEVYFANGCDLHMTIEMLTQLELQVDGSFHQNLNSKTLSAPNLSAMDFPALTSPDGQTASVKYSVDNVQQSGNPYRSSDKDILSFKTSSSIPTRGAIDFASAVRKLASQDSGIWKYDKSGSGDAAIGSSRTSHVLAGYDGGLGRASFSDRLQTRGSTRAAPVWVDTGDAVANMYSELREEARDHARLRNAYFEQARQAYLIGNKALAKELSAKGQVHNMHMKAAHGKAQESIYRQRNPVAPEMQGNGRGQERMIDLHGLHVSEAIHVLKHELSVLKNTARAADQPLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGLDFTEPQPGLLRVVIFPMMRSTSILLLSRPSLFPSSFSFSTTSLSQWFSFLRHAIATSDLLLGKRGHALIITSGHHHDPFLVNNLITMYGKCGSLSCARHLFDVIPHRDLVTWNAILSAYAQAGDADIVNAHEGFRLFRVLRESFVLTTRHTLAPVFKLCLLSGCEWASQVLHGYAVKIGLEWDVFVAGALVNIYAKFGRIRDARVLFEGMPVRDVVLWNVMIKAYVEMGLQDEALFLFSAFHRSGLCPDDVTVRSVLMGVSRTGFELQLKQVRAYATKLFLLDHDWEVVIWNKTLSDYLQAGETTEAIECFMDMIKLRVAYDNMTLLVMLSVVASEKNINMGKQIHCVVVKMESDRVVSVANSLLNMYMKAGSIDYAKIVFSQMKEKDLISWNTIISGCTLGGSVELSISFFVNLLRSCLLPDQFTIASVLRACSSLKEGVYFSRQIHTYAIKAGIIYDSFVSTALIDAYSKSGKMEEAELLFRIHDGFDLASWNAMMHGYIVSKCYHKALELFIQMLGSGEQGDQITLANAAKAAGCLVGLEQGKQLHAIAIKRIFNLDLFVISGILDMYLKCGEMQSACKVFSKIPSPDDVAWTTMISGCVDNGYEEHALFTYHQMRLAGVQPDEYTFATLVKASSLLTALEQGRQIHANVIKLNCALDPFVMTSLVDMYAKCGNIEDAYRLFKKMNMKSIASWNAMIVGLAQHGNAKEALNLFKDMKSKDEMPDRVTFIGVLSACSHSGLVSEAYENFYSMQRDHRIEPEIEHYSCLVDALSRAGRIQEAEKVISSMPFEASASMYRTLLNACRVQGDKVKGKHVAETLLTLEPSDSAAYVLLSNIYRAANQWESAVSARNMMRRVNVKKDPGFSWIDIKNKVHLFVAGDRSHEEADLIYNKVDHIMKRIKEEGYVPDTDFALVDIEEEEKESALYYHSEKLAIAYGIVRTPPSIPLRVIKNLRVCGDCHNAIKYMSKAFQRDIVVRDANRFHHFRSGICSCGDYW* 1560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1702 1559 ProSiteProfiles Smr domain profile. 494 575 IPR002625 -
Ahy10g1702 1559 Pfam PPR repeat family 1150 1196 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat family 1252 1299 IPR002885 -
Ahy10g1702 1559 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1050 1084 IPR002885 -
Ahy10g1702 1559 SUPERFAMILY SMR domain-like 492 573 IPR036063 -
Ahy10g1702 1559 Pfam PPR repeat 1053 1081 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 670 686 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 950 976 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 776 805 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 1326 1350 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 922 948 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 1225 1251 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 1024 1044 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 749 773 IPR002885 -
Ahy10g1702 1559 Pfam PPR repeat 849 878 IPR002885 -
Ahy10g1702 1559 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1151 1185 IPR002885 -
Ahy10g1702 1559 Pfam DYW family of nucleic acid deaminases 1467 1559 IPR032867 GO:0008270
Ahy10g1702 1559 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 774 808 IPR002885 -
Ahy10g1702 1559 Gene3D Tetratricopeptide repeat domain 847 1001 IPR011990 GO:0005515
Ahy10g1702 1559 Pfam E motif 1374 1431 IPR046848 -
Ahy10g1702 1559 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1221 1251 IPR002885 -
Ahy10g1702 1559 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 803 1552 - -
Ahy10g1702 1559 MobiDBLite consensus disorder prediction 1 21 - -
Ahy10g1702 1559 Gene3D Tetratricopeptide repeat domain 605 725 IPR011990 GO:0005515
Ahy10g1702 1559 Gene3D Tetratricopeptide repeat domain 1004 1096 IPR011990 GO:0005515
Ahy10g1702 1559 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 948 982 IPR002885 -
Ahy10g1702 1559 Pfam Domain of unknown function (DUF1771) 414 477 IPR013899 -
Ahy10g1702 1559 SUPERFAMILY TPR-like 778 1411 IPR011990 GO:0005515
Ahy10g1702 1559 Gene3D - 461 574 IPR036063 -
Ahy10g1702 1559 CDD CUE_CID7_like 222 264 IPR041806 -
Ahy10g1702 1559 Gene3D Tetratricopeptide repeat domain 1316 1386 IPR011990 GO:0005515
Ahy10g1702 1559 PANTHER - 621 824 - -
Ahy10g1702 1559 PANTHER - 803 1552 - -
Ahy10g1702 1559 Gene3D Tetratricopeptide repeat domain 1097 1198 IPR011990 GO:0005515
Ahy10g1702 1559 Gene3D Tetratricopeptide repeat domain 726 842 IPR011990 GO:0005515
Ahy10g1702 1559 Gene3D Tetratricopeptide repeat domain 1199 1315 IPR011990 GO:0005515
Ahy10g1702 1559 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 621 824 - -
Ahy10g1702 1559 TIGRFAM PPR: pentatricopeptide repeat domain 1226 1248 IPR002885 -
Ahy10g1702 1559 TIGRFAM PPR: pentatricopeptide repeat domain 1153 1187 IPR002885 -
Ahy10g1702 1559 TIGRFAM PPR: pentatricopeptide repeat domain 1327 1350 IPR002885 -
Ahy10g1702 1559 TIGRFAM PPR: pentatricopeptide repeat domain 776 809 IPR002885 -
Ahy10g1702 1559 TIGRFAM PPR: pentatricopeptide repeat domain 1255 1287 IPR002885 -
Ahy10g1702 1559 TIGRFAM PPR: pentatricopeptide repeat domain 1053 1082 IPR002885 -
Ahy10g1702 1559 SMART DUF1771_2 413 478 IPR013899 -
Ahy10g1702 1559 SMART SMR_2 491 575 IPR002625 -
Ahy10g1702 1559 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1252 1286 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1702 Ahy-Chr10 97233506 97241863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1702 808 1559 Glycoside Hydrolase AT3G49170 35.686 6.13e-157 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1702 - - gsj:114408324 2325.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2138 20 119380294 119388765 Ahy10g1702 10 97233506 97241863 hybridization