Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1679 ATGAATGAGACATTGAATGTAGCGGCACAAATGGGAGACATAGACTTGCTCTACAAGCTTCTTCAGGTGGATCCATATCTCTTGGACCGCATTGCTTCCGTACCATTCATCAATACACCTCTGCATTTTGCAGCCTCCGCGGGTCAAACCAGTTTTGCCACTGAGATCATGAGACTGAAGCCTATCTTTGCATGGAAGCTGAACCTGTATGGGTTTAGCCCCGTGCACCTTGCATTACAGAACGGAAACTACAGAACGGTGTGCAGATTTATAGACATCAACAAAGACCTTGTCCGGGTCAAGGGAAGAGAGGGACTCACACCTTTGCATTTTGCGACTAAGATTGGGCAAACCGATCTTGTAGCGAGATTCTTGTCGGCTTGCTCAGGTTCCATTGAAGATGTGAATGTGGGGAGTGAGACTGCTTTGCATATTGCGGTTAAGTATAAGCAGCTTGAGGCTCTTGAGGTTCTGGTCGGTTGGGTTCGTAGGAGTTGCCACAAGTGTGCTCACGCAACAGAGAAACGGGTACTCAATTGGGTGGACGATAAAGGCAACAACGTTCTCCACCTTGCACTTCTCAAAGCCTTACCACCACAGACGGTTAGATTGTTGATAGACAGCAACATTGACTTAAACATCAAGAATTTAGAGGGCTCAACAGCTTTAGACATTGTGGAGAACAATCAAAGGCAACAAGTTAACACTTCAGATATCACTCAGATTAGGGACATGTTAGTTAGAGCGGGAGCTTTACGCGCCACCTCAGTGGCCGTCACACCCCTGGAAGAAGACCTAAGATCAAGAATCACTTTCCACGAGAGAGTAGCAATCTACATCACGCGCCTCAGAAGGCGAATCTCAAACGACACGCGCAACGCGCTCTTAGTAGTGGCGATACTCTTCGCAACGAGCACCTACGAAGCCGCAATTAACCCCCCCGGCGGGGTGTACCAGGCGGAGGCCAAATCTCCACCATCTCCACCACCACCTTCGAGCAAGTTCAGCATCCACTTCAGGCTTAACCATCATCATAATAACAATGTTGGTGCTGGGAAAGCGGTGATGAGAGTTCAAGATTTCATTTGGTTCTGGTCATTTAACACGTGCGCTTTTTATCTATCGATTTTGATGATATGTTTGTTAATGCCGAGAGGGCGTGTTAGTGTTATAGTGGCTTCTCCGCTGTTTCTATTCTGTGGTTGCTATGTGTTTTCCATGCTCGTTATTTCGCCAAGCTGTAAATTGGGCATAGCAGCTGTGGCTCTACCATGCATTCTTTTGGTTTTGAACTTTTGGGTAGGTTCGGTATACATTCGATTATCCAAAAAGCTCAGAAGATATCGTTCTAAACAGGAAGATGGATCTAGATTCTCAGGAGGAAACAAATGGTGA 1395 0.4652 MNETLNVAAQMGDIDLLYKLLQVDPYLLDRIASVPFINTPLHFAASAGQTSFATEIMRLKPIFAWKLNLYGFSPVHLALQNGNYRTVCRFIDINKDLVRVKGREGLTPLHFATKIGQTDLVARFLSACSGSIEDVNVGSETALHIAVKYKQLEALEVLVGWVRRSCHKCAHATEKRVLNWVDDKGNNVLHLALLKALPPQTVRLLIDSNIDLNIKNLEGSTALDIVENNQRQQVNTSDITQIRDMLVRAGALRATSVAVTPLEEDLRSRITFHERVAIYITRLRRRISNDTRNALLVVAILFATSTYEAAINPPGGVYQAEAKSPPSPPPPSSKFSIHFRLNHHHNNNVGAGKAVMRVQDFIWFWSFNTCAFYLSILMICLLMPRGRVSVIVASPLFLFCGCYVFSMLVISPSCKLGIAAVALPCILLVLNFWVGSVYIRLSKKLRRYRSKQEDGSRFSGGNKW* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1679 464 Pfam Domain of unknown function 289 385 IPR026961 -
Ahy10g1679 464 PANTHER ANKYRIN REPEAT PROTEIN 10 429 - -
Ahy10g1679 464 SUPERFAMILY Ankyrin repeat 4 232 IPR036770 -
Ahy10g1679 464 ProSiteProfiles Ankyrin repeat profile. 184 217 IPR002110 GO:0005515
Ahy10g1679 464 ProSiteProfiles Ankyrin repeat profile. 104 137 IPR002110 GO:0005515
Ahy10g1679 464 Gene3D - 1 239 IPR036770 -
Ahy10g1679 464 SMART ANK_2a 36 65 IPR002110 GO:0005515
Ahy10g1679 464 SMART ANK_2a 104 134 IPR002110 GO:0005515
Ahy10g1679 464 SMART ANK_2a 138 168 IPR002110 GO:0005515
Ahy10g1679 464 SMART ANK_2a 184 214 IPR002110 GO:0005515
Ahy10g1679 464 SMART ANK_2a 70 99 IPR002110 GO:0005515
Ahy10g1679 464 ProSiteProfiles Ankyrin repeat region circular profile. 104 125 - -
Ahy10g1679 464 PANTHER HOMEOBOX PROTEIN WARIAI 10 429 - -
Ahy10g1679 464 Pfam Ankyrin repeats (3 copies) 101 159 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1679 Ahy-Chr10 96209673 96212224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1679 1 322 Miscellaneous Gene Families AT4G10720 45.511 4.54e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1679 - - aip:107621997 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g2115 20 118360516 118362953 Ahy10g1679 10 96209673 96212224 hybridization