Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1560 ATGAATCTTCGAATTTCAAACACAAACACCATCGATTTACTTCAGCTTTCTAAACCTTTCTTCCCTCGTAAAACCCTTTTCCCCCATTCCTTACCTCAACGCCTTCTTCTCAGAACTAGATTACGCCGTAAACACTCTTCCATCACTCTCCGCAACCTCACTGTAACTGCTTCTAATGCTCCCAATCCTCTTTCAAACTCAGCAACTCTCGCCCAACAAGAGCAACAAGAAGAAGAAGAAGATGCTGAGTCTGCTCAGCTATTCGAGAGACTGAAAGAGGCCGAAAGGAAACGGGTGAATGAAATGGAAGAGTTTGAGAAGAAGGCAAATATGCAGTTAGAGAGGCAGCTTGTGATGGCTTCTTCATGGAGCCGAGCTTTGTTGACCTTGCGTGGAAAGCTGAAGGGAACTGAGTGGGATCCTGAAAACTCCCACAGGATAGACTTCAGCGAGTTTATGAGACTTCTTGACTCTAATAATGTCCAGTTTATGGAGTACTCCAATTATGGCCAAACAATATCAGTGATTCTACCATACTACAAAAATGGGAAAACACCAGGGACTGAAGGTAATCCTAAGGATATTGTTTTTCGCCGGCATGTGGTAGATCGAATGCCAATTGATTGTTGGAATGATGTTTGGAGAAAACTGCATCAGCAAATTGTAAATGTTGATGTCATTAATGTGGATACTGTACCTTTTGAAGTTTACACAACTGTCGCAACTGCAGTCATATGGTCTATGCGTCTTGCTGTGGCTGTTGGGTTTTACGTGTGGATTGATAATTTGATGAGACCAATATATTCAAAGTTGATACCTTGTGATTTAGGATCTCCTACCCAGCAAACTAAGCAGCCACTCAAACGCCAAGCACTTGGATCGCTGGGCAAAAGTCGGGCTAAATTTATATCTGCAGAAGAAAGAACTGGTGTCACTTTTGATGATTTTGCTGGCCAGGAATATATAAAGAGGGAATTGCAAGAGATTGTACGAATTTTAAAGAATGATGAGGAGTTTCAAGACAAAGGAATTTATTGCCCAAAAGGTGTGCTTCTCCATGGACCTCCAGGAACGGGTAAAACTCTACTGGCTAAAGCCATCGCTGGGGAAGCAGGGTTGCCTTTTTTTGCGGCAAATGGCACAGATTTTGTAGAGATGTTTGTAGGGGTTGCTGCATCACGTGTTAAGGATCTTTTTGCTAGTGCAAGGTCATTTTCACCTTCTATCATATTTATTGATGAGATAGATGCTATTGGTAGCAAGCGTGGAGGACCTGACATTGGTGGAGGAGGTGCTGAACGGGAACAAGGCTTACTTCAGATACTTACTGAGTTGGATGGATTCAAAGTTTCTACAGCACAGGTGCTTGTGATCGGTGCTACAAATAGATTAGACATTCTTGATCCTGCTTTGTTGAGGAAGGGTCGTTTTGACAAGATCATTCGAGTTGGTTTGCCATCAAAGGATGGAAGATTTGCCATTTTGAAGGTGCATGCTAGGAATAAATTCTTTCGCTCCGAGGAGGAAAAGGAGATTCTTCTTAGGGAAATTGCAGAGCTTACAGAAGATTTTACTGGAGCAGAGCTACAAAATATACTGAATGAAGCTGGAATTTTGACAGCCAGGAAGGATTTGGATTACATTGGGCGAGATGAGCTACTTGAGGCATTAAAGAGGCAAAAAGGAACTTTTGAAACAGGGCAAGAGGATAGTGCTGAAATTCCTGAAGAATTGAAGCTTAGACTGGCATACAGAGAAGCGGCAGTTGCTATTCTTGCATGTTATTATCCTGAACCACACCGCCCTTTTGTTGAGACTAATATAAACTCAATCCAGAGCCGGCCTAATATGAGTTATTCTGAGACTACTGGCCAAGTTTTTGCGAGGAAGTCAGATTATGTAAATTCTATTATCCGTGCATGTGCTCCAAGAATAATTGAGGAGGAGATGTTTGGAATTGACAACTTATGTTGGATCTCTGCAAAGTCAACGTTAGAAGCTTCAAGGCGTGCTGAGTTTTTAATTTTACAGACAGGAATGACAGCATTTGGGAAAGCATACTTCAAAAACGAAAGTGATCTTGTACCTAATCTTGCAATGAAGCTTGAAGCGCTCCGAGATGAGTATATGCGTTATGCTACAGAAAGGTGTTCATCCGTGCTCAGAGAATACCAGGAAGCAGTTGAGACAATCACAGATATTTTGCTTGAAAAGGGGCAAATCAAAGCTGAGGAGATATGGGACATTTACAAGAGTGCTCCTCGTCTAACTCAGCCTCCTGTGAGTCCAGTTGATGAATATGGAGCACTGATTTATGCTGGACGATGGGGAATCCATGGGATCAGCCTTCCGGGAAGAGTTACATTCGCACCTGGCAATGCCGGGTTTGCGACCTTTGGAGCTCCTCGCCCAACCGAGACACAAATTGTGAGCGACGAAACTTGGAAGCTAGTAGATGGTATATGGGACAAAAAGATTCAAGATATTAGAGATGAATCTACAAAGGTGATCGAAGAAGAGAAAGAAACGCCACAACTTTTGATGGCAAGCCATTTCCTTTGA 2562 0.4258 MNLRISNTNTIDLLQLSKPFFPRKTLFPHSLPQRLLLRTRLRRKHSSITLRNLTVTASNAPNPLSNSATLAQQEQQEEEEDAESAQLFERLKEAERKRVNEMEEFEKKANMQLERQLVMASSWSRALLTLRGKLKGTEWDPENSHRIDFSEFMRLLDSNNVQFMEYSNYGQTISVILPYYKNGKTPGTEGNPKDIVFRRHVVDRMPIDCWNDVWRKLHQQIVNVDVINVDTVPFEVYTTVATAVIWSMRLAVAVGFYVWIDNLMRPIYSKLIPCDLGSPTQQTKQPLKRQALGSLGKSRAKFISAEERTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQDKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASARSFSPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTELDGFKVSTAQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRFAILKVHARNKFFRSEEEKEILLREIAELTEDFTGAELQNILNEAGILTARKDLDYIGRDELLEALKRQKGTFETGQEDSAEIPEELKLRLAYREAAVAILACYYPEPHRPFVETNINSIQSRPNMSYSETTGQVFARKSDYVNSIIRACAPRIIEEEMFGIDNLCWISAKSTLEASRRAEFLILQTGMTAFGKAYFKNESDLVPNLAMKLEALRDEYMRYATERCSSVLREYQEAVETITDILLEKGQIKAEEIWDIYKSAPRLTQPPVSPVDEYGALIYAGRWGIHGISLPGRVTFAPGNAGFATFGAPRPTETQIVSDETWKLVDGIWDKKIQDIRDESTKVIEEEKETPQLLMASHFL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1560 853 Gene3D - 294 484 IPR027417 -
Ahy10g1560 853 Coils Coil 503 530 - -
Ahy10g1560 853 Gene3D - 486 566 - -
Ahy10g1560 853 Gene3D Peptidase M41 568 755 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Ahy10g1560 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 559 IPR027417 -
Ahy10g1560 853 ProSitePatterns AAA-protein family signature. 455 473 IPR003960 GO:0005524|GO:0016887
Ahy10g1560 853 Coils Coil 70 111 - -
Ahy10g1560 853 SUPERFAMILY FtsH protease domain-like 575 756 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Ahy10g1560 853 MobiDBLite consensus disorder prediction 57 84 - -
Ahy10g1560 853 Pfam AAA+ lid domain 514 554 IPR041569 -
Ahy10g1560 853 PANTHER METALLOPROTEASE M41 FTSH 58 822 - -
Ahy10g1560 853 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 4, CHLOROPLASTIC-RELATED 58 822 - -
Ahy10g1560 853 SMART AAA_5 346 487 IPR003593 -
Ahy10g1560 853 CDD AAA 317 485 - -
Ahy10g1560 853 MobiDBLite consensus disorder prediction 57 73 - -
Ahy10g1560 853 Pfam ATPase family associated with various cellular activities (AAA) 350 484 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1560 Ahy-Chr10 90910901 90916751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g1560 267 594 Miscellaneous Gene Families AT3G47060 43.902 7.31e-68 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1560 - - ahf:112783256 1626.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1995 20 113142034 113147835 Ahy10g1560 10 90910901 90916751 hybridization