Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g1032 ATGCCAACCCCGGTGGCAGCAGCCCGGCAATGCCTAACACCAGAGGCTGCCCGCGCCCTCGACGAGGCGGTGTCCGTTGCCCGCCGTCGCGGCCACGCCCAAACCACCTCTCTCCACGCTATCTCCGCCCTCCTCTCCCTCCCCTCCTCCTCCCTCCTCCGCGACGCATGCTGCCGCGCCCGCAACTCCGCCTACTCGCCCCGCCTTCAGTTCAAGGCCCTCGACCTCTGCCTCTCCGTGTCCCTCGACCGCTCCCCTTCCTCCAACCCATCCACTGACCCGCCCGTCTCTAACTCCCTCATGGCAGCCATCAAGCGGTCTCAGGCCAACCAGCGCCGACACCCTGACACGTTCCATAACCAACTCTTGTTCCAAAGTAACCACTCTAACAACCTCCAACAAACTCAGCAACCGTTTTCTGTTTCGTCGGTTAAAGTTGAGCTGCAGCATTTGGTGATATCGATTCTTGATGACCCGGTTGTCAGTCGGGTTTTCGCAGAAGCGGGTTTCCGGAGCTCCGAAATTAAGCTCGCGATACTCAGGCCCTTGCCCCAGCTTTTTCGCTACTCGAGATCGCGTGGGCCGCCGGTTTTTCTATGTAACTTGCCGGAACAAGGCCGCCGGGGAGGGTTTTTCGGGTTCCCGTTTTCCGGCGGCGGAGACGGAGGGGAGGATGAGAGTTTCAGGAGGATTGGGGAGGTTCTGGTGAGAAGCAAGGGGAGGAACCCGGTGCTGCTTGGCGCGTGTGCTGGCGAGGCGATGCGGCAGTTCGTGGAGGCGGTGGAGAAGCGGAGGGAGGGGGTGCTGCCGGTGGAGCTGGTAGGGTTGAGGATTGTATCCGGGATTAGGGAAGCGGAGGAGGTGGCGGAGAAGGGCGTGGGGCCAGGAGTGGTGGTGAATTTGGGGGACTTGAAGGGTTTTGTGGCGGAGGAGGAGAATAGCGGCGGTGAAGAGGGTGTTCTTGGGGAACTGGGGCGGTTGTTGAAGGTTCATAGTGAGAGGGTATGGTTGATTGGTTTTGCTCGGAGCTATGAGTCTTACTTAAAGTTTGTTGGAAGGTTTCCTTTTGTCGAGAAAGATTGGGATTTGCAGCTTCTTCCAATTACTTCTCTTCAATCTTGCCAGAAACCAAGTTTAATGGATTCATTTGTACCATTTGGTGGATTTTTCTCTTCCCCTTCTGATTTGAAAAGTCCACTACCTGGCTGTACTCCCAATCTCAGGCACCGTCAAAACAGCGAAAGGTGTGAACAAGAAGTGCCTGCTCCAAAGGAAAGATTTTCTTCTTTAGCTGTTGAACCATGTCAATCTAACTATCAGCCATGGCTACAGATTGCAGAAATTAATGCAGCAAAAGGATTGAATGCTAAGACCAAAAAAGATGATTTTCTTTTATTGGATGGTGGTAAATCCTTGCGAACTCATAAGAACATGGATAATGTTTACTATCATCTGCGCCAGGGATTTTCCGAAGCAAATTCTTGTCCGAATGTTATGGGTTTTCTTTGTACTAAAGATAAAAAGAAAGATGCTGAAAATCGCGACAACAAAGTTACAGACAATTCTCCCGTTGAAGTCATCGATCTAAACTCGGAAGTTCCAGTCAATGTGCAAATTATGTCTACATCACAACCAACCAGTCCTTTTTCTTTGGCTTTCAAGGAAATGCAGGGGAAGCATACTTCGAAACTTGTGGAGATGTTCCAAAAAGCTGAAGATCTCGAGTTAGCTGACCTGAGATCATGCAACATCTCCAATTCAAGTGTGTGCGATGGTAGTGAAATGTCTCCAACTTCAGTTAATTCTGTAACCACAGATCTGGGTCTAGGAATATGTCCTTCTCCTACCAGCAATAAATTTAAGAAACCTACTGACGAATATTCAATGGATCCTCCAAAGCAAATCGGGAGTCAATTTTCTTCGAACTTCAATTTGGCTGATGGGAATATCTTGAAGCATCTGTCACAGTCTTCTTCCTGCTTAAGTTTCGACCATGTTAGACAAGTTGATGCGAGAAATCCCAAAAGCCTTTTTGAAGCTCTATCGAAGGAGGTAACCTGGCAAGATGAAGCATTACATGCTATCGTCAAAGCAATAGTTTGCAGTCCAATAAAAAGGATTAGACCATGTGGAGCAATTCAACGAGGCGACTTATGGATGAATTTTGTGGGACCTGATAGGCACGGCAAAAAGAAAGTAGCCGTTGCTTTAGCTGAGATTTTGTATGGAAGTCGGGACAGCTTTATTTGTATGGATCTAGGTTCCAAAGAAATGAAAGCATCCAACGCTGTGAAATTTAGGGGAAAGACTACTCTTGATTTTATTGTGGGGGAGTTTTGCAAGAAAACTTTGTCTGTGGTTTTTCTTGAAAACGTAGATAAGGCAGATGCAGTAACTCAAAGCAGTTTGTTGCAAGCCATCAAGACTGGAAAAATAACAGACTCGCACGGTCGAGAAATCGGATTAAACAATGCCACATTTGTGACTTCGTTTTTAAATTACAAAGATAGTTTGACGTTAACAGAAGAACCTTCCAACTATCCTGAGGAAAGGATACTAATGGCAAAAAGAGGAGCTATCAAGATCAAAGTTGAGCATGCCATTGGAGACATCATATCTAACAGTCTGAGAGATGCTATGCCAGATCTAGTTTTTGTAAATAAACGAAAATTGATCGGTGATAATGAATTTCACCACGACCGGCATTTAATCTCAGATATGCCTAAAAGGGCACATATAGCATCAAATTGGCTTTTGGATTTGAATCTTCCAGCTGAAGAGAGTGAATCACAACAAATGGACAGTGAAAATTCCAAACATGTCTCAACTGGGAACCAAAACATTTGGTTGCAAGATTTGTGTGATCAAGCTTACCAAACGGTTGTTTTCAAACCTTTCAATTTTGATGCGCTGGAAGATAGAGTGTTAGAAGTGATTAGAAGTAACTTCAACAAGATTCTTGGATCAGAATGTGTCTTACAAATTCAGTCAGAAGTCATTGACCAGTTGCTCGCAGCAGCATATGTCTTGGACCAGGATACAGTGGTGAAGTGGGTGGAGCAAGTTCTGAGCGAAGGATTCATCGAAGTACAGAGAAGGTGCAACCCCACAGCTAGTTCAATTGTGAAACTTGCTTCATATCAAGATCAAGCTTTAAGTGTATACCTTCCACCAAGAATACTTTTGGATTGA 3192 0.4646 MPTPVAAARQCLTPEAARALDEAVSVARRRGHAQTTSLHAISALLSLPSSSLLRDACCRARNSAYSPRLQFKALDLCLSVSLDRSPSSNPSTDPPVSNSLMAAIKRSQANQRRHPDTFHNQLLFQSNHSNNLQQTQQPFSVSSVKVELQHLVISILDDPVVSRVFAEAGFRSSEIKLAILRPLPQLFRYSRSRGPPVFLCNLPEQGRRGGFFGFPFSGGGDGGEDESFRRIGEVLVRSKGRNPVLLGACAGEAMRQFVEAVEKRREGVLPVELVGLRIVSGIREAEEVAEKGVGPGVVVNLGDLKGFVAEEENSGGEEGVLGELGRLLKVHSERVWLIGFARSYESYLKFVGRFPFVEKDWDLQLLPITSLQSCQKPSLMDSFVPFGGFFSSPSDLKSPLPGCTPNLRHRQNSERCEQEVPAPKERFSSLAVEPCQSNYQPWLQIAEINAAKGLNAKTKKDDFLLLDGGKSLRTHKNMDNVYYHLRQGFSEANSCPNVMGFLCTKDKKKDAENRDNKVTDNSPVEVIDLNSEVPVNVQIMSTSQPTSPFSLAFKEMQGKHTSKLVEMFQKAEDLELADLRSCNISNSSVCDGSEMSPTSVNSVTTDLGLGICPSPTSNKFKKPTDEYSMDPPKQIGSQFSSNFNLADGNILKHLSQSSSCLSFDHVRQVDARNPKSLFEALSKEVTWQDEALHAIVKAIVCSPIKRIRPCGAIQRGDLWMNFVGPDRHGKKKVAVALAEILYGSRDSFICMDLGSKEMKASNAVKFRGKTTLDFIVGEFCKKTLSVVFLENVDKADAVTQSSLLQAIKTGKITDSHGREIGLNNATFVTSFLNYKDSLTLTEEPSNYPEERILMAKRGAIKIKVEHAIGDIISNSLRDAMPDLVFVNKRKLIGDNEFHHDRHLISDMPKRAHIASNWLLDLNLPAEESESQQMDSENSKHVSTGNQNIWLQDLCDQAYQTVVFKPFNFDALEDRVLEVIRSNFNKILGSECVLQIQSEVIDQLLAAAYVLDQDTVVKWVEQVLSEGFIEVQRRCNPTASSIVKLASYQDQALSVYLPPRILLD* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g1032 1063 Coils Coil 1061 1063 - -
Ahy10g1032 1063 ProSiteProfiles Clp repeat (R) domain profile. 8 185 IPR004176 -
Ahy10g1032 1063 PANTHER PROTEIN SMAX1-LIKE 8 1 1061 - -
Ahy10g1032 1063 Gene3D - 10 181 IPR036628 -
Ahy10g1032 1063 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1061 - -
Ahy10g1032 1063 SUPERFAMILY Double Clp-N motif 12 118 IPR036628 -
Ahy10g1032 1063 Gene3D - 646 884 IPR027417 -
Ahy10g1032 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 670 829 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g1032 Ahy-Chr10 23035976 23040463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g1032 - - gmx:100800606 1271.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1399 20 32645649 32650011 Ahy10g1032 10 23035976 23040463 hybridization