Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0906 ATGATGGATCCCCGCGAAGACATCAACAAACCGATAGTACTCATCACGGGGTGCTCCGAGGGAGGCATAGGCCACGCGCTTGCACGCGCCTTCGCAGCCAACAAGTGCGCTGTCGTCGCCACCAGCAGGTCGCGCTCCACCATGGCGGACCTTGAGCACGACACCCGCTTCTTCCTTCAGGAGCTCGACGTCAAGTCCGACGACAGCGTCCGCCGTGCTCTCGACGCCGTCATTGCCCACTTCGGCCGTGTCGACGTTCTTGTCAACAATGCCGGCGTTCAGTGTGTGGGCCCTCTTCCCGAGGTTCCTCTCTCTGCGATTCAGAGCACCTACGAAACCAACGTCTTCGGTGCCTTGAGGATGATTCAGGCTGTTGTTCCTCATATGGCAAAGAGGAAACAGGGTAAGATTGTGAATGTTGGAAGCGTTACGGCTATGGCATCTGGACCTTGGTCTGGCGCATATACTTCGTCCAAAGCTGCCCTTCATTCTTTGACAGATACCCTAAGATTGGAACTTAGCCATTTTGGAATTGATGTTGTCAATGTTGTCCCTGGAGCTATCAAGTCAAATATTGGAAATTCCGCCATAGCTAGCTACGACCACATGCCTGAGTGGGACTTATTCAAGCCTTTTGAAGCCGCAATTCGAGATAGAGCTTATTTTTCTCAGAAAACAAAGTCAACCCCCAATGATGAGTTTGCGAAACACACCGTGGCCGCTATCCTGAAGAAGAAGCCACCAGCGTGGTTCTCCTACGGCCATTACTCTACCGCAATGGCCATCATGTACCATTTGCCGCTGTGTGTTAGGGACTTTATTTTGAAGAAAGCGATGAAATGCTGA 846 0.5201 MMDPREDINKPIVLITGCSEGGIGHALARAFAANKCAVVATSRSRSTMADLEHDTRFFLQELDVKSDDSVRRALDAVIAHFGRVDVLVNNAGVQCVGPLPEVPLSAIQSTYETNVFGALRMIQAVVPHMAKRKQGKIVNVGSVTAMASGPWSGAYTSSKAALHSLTDTLRLELSHFGIDVVNVVPGAIKSNIGNSAIASYDHMPEWDLFKPFEAAIRDRAYFSQKTKSTPNDEFAKHTVAAILKKKPPAWFSYGHYSTAMAIMYHLPLCVRDFILKKAMKC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0906 281 PANTHER BNAC02G00550D PROTEIN 9 279 - -
Ahy10g0906 281 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 142 170 IPR020904 GO:0016491
Ahy10g0906 281 PANTHER NADPH-DEPENDENT 1-ACYLDIHYDROXYACETONE PHOSPHATE REDUCTASE 9 279 - -
Ahy10g0906 281 Gene3D - 11 269 - -
Ahy10g0906 281 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 11 184 - -
Ahy10g0906 281 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 271 IPR036291 -
Ahy10g0906 281 CDD 17beta-HSD-like_SDR_c 12 257 - -
Ahy10g0906 281 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 IPR002347 -
Ahy10g0906 281 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 IPR002347 -
Ahy10g0906 281 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 IPR002347 -
Ahy10g0906 281 PRINTS Glucose/ribitol dehydrogenase family signature 13 30 IPR002347 -
Ahy10g0906 281 PRINTS Glucose/ribitol dehydrogenase family signature 129 145 IPR002347 -
Ahy10g0906 281 PRINTS Glucose/ribitol dehydrogenase family signature 176 193 IPR002347 -
Ahy10g0906 281 PRINTS Glucose/ribitol dehydrogenase family signature 82 93 IPR002347 -
Ahy10g0906 281 PRINTS Glucose/ribitol dehydrogenase family signature 155 174 IPR002347 -
Ahy10g0906 281 Pfam short chain dehydrogenase 12 195 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0906 Ahy-Chr10 15167086 15169768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy10g0906 2 192 Acyl Lipid Metabolism Gene Families AT1G62610 28.922 1.99e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0906 - - gmx:100789660 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1229 20 23129342 23133851 Ahy10g0906 10 15167086 15169768 hybridization