Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy10g0904 ATGTCGTCGTCGAAGTACCCCATACTTGACAACCGGCCGATTCATCAGTGGAAGGTTACAGAACTGAAAGAGGAGCTGAAGAGGAGGAGATTAACCACCAAGGGTTTGAAGGACGAGTTGGTGAGGCGATTGGACGAAGCTCTTCGTGCTGAGATGGAGGCTGATGAGACTGCCTCGAAGGATGATGCAAACGGTTTTGAGGTCCATGCGGGTGGTGGCAGTGAAGATTCGCAAACGGTTGCTGCAGATGTTGAAGTGGTTCAAACAATTGAAGAGGAAAGTGTCCAAACCATGGAAAAGGGGAATAATGATAATGTTGAGCCAACTCAAGAAGTTGAGACTGTGGAGAAGGGGAATACTGTTGTAGTTGAGCCAATTGATACAGAGAGCACAGAGAAAGTTCAGGAGGATGTGGATGACGACAGCAAGAAGAATGACAAGCAGGGTGGTGTTGCCAACCCAGTTGACATTAACAGTAGTGTGTCAGCTGTGGATGAAGATATCGAACAAGCTGGTTTGCCAGCCGGTGTAGATCCTGAAAATGTGAAAGATGAGCAAAGTGCTCATGGCTCTACTGTGGAGACATCCGATAAAATCACGGAGACTGTATCAACTGAAGTAGTGGTCAGTGATCAGCATACTCATAGTGAAGTAAAGAGTAACAATGATTCGACAATCAAGGTGGAGAATGAGGAATCAAAGGCGCAGCTGGACAATGAGGTCCCAAAGCCCCAACTGGAGTGTGACACAAAGCCCCAACTGGAGTGTGACACAAAGCCCCCGTCTGAGGATCTCATGCCCAACACTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTTTCAAGTAAAATCTGATTCTATTTCTAGTGATTCTGTGTCAATTAATCAAAAGAATGAATTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAGGCCGGAGATGGTGGAAGAACCATCATCCAGAAAAGATGTACCTGTATCACACTCAATGGATGTTGGAGGGCTGCTTGAGAAAAAGGCATCTGTTGAGGAAAATAGCAATAATGTTACGACTCCAGACTTGAACAAGATCAATAGCAATGATGATGTGGGGTATCCAGAAAAGTTAAACCTAGATAGAAGTTCTGGTGATGATTCCATGGAAGAGGATTTACCTGAGAGTAAACATGTTGATTCTAAGTTTGATGTTGATGAAAGAGACAATGTGGAGAATATTGAGGTGTCCATTGTGAAGGAGGAAAGTAAAACTATAGTCGCGAAGAATGATCTATCTGCAGGGAAAACTGATACTCATCAGGACATTGACATTAGTCCTGTTGCCTTGGCTGAGAAACGAAAATTTAATGAGCAAGTTTCAGTTGGGAGCAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACCGAAACAGTTAAAGGGCCAGATCTGAAAAGCACTGTTCCCAGAGCTGCAACTACACCAAAGGACGAGCCAGTTGCGCTGAAACGCAACTTCTCTAGGTCTGATTCAACTGTAACTGATGATGCACCTAAAGAACGCATTGTTCCACCATCACAAAAGCCCCCAACTAATTCCCTCCGAATCGATCGTTTCCTCCGTCCTTTTACCCTAAAACAAGTGCAAGAGCTTCTTGGTAAAAGTGGGAGTATCACTAGTTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACTTACTCATCAGTTGAAGAAGCTATTGAGACCAGAAATGCTGTGTATAATTTGCAATGGCCTCCAAATGGTGGGCGGCTCTTAGTTGCCGAGTTTGTTGATCCTCAGGAGGTGAAAATGAAGTTAGAACCTCCTCCTCCTCCTCCTCCTGCAGCCGCCCCTGTCAGCAGTGGTCCAGCAGTTCTTCCTACACCACCATCCTCACAACCAGAGCCTTCCCCCCGTATGCGCAGGGAGCAACCTCCAGCTCCAGCTACTCTCCCACCTCCACCTCCATTGTCGAAGCTCCCACCAGCGGCAAGGGAACGGCTTCCGTCCCCACCGCCCCTTCCAGAGAAGGTTGACCCACCTATTCTCACGTTGGATGATCTCTTCCGCAAAACCACAGCAACTCCTCGCATCTACTATTTACCTTTGTCTGAAGAGCAAGTATCTGCTAGACTTGCAGCTCGCAGTAAAAGCACTCGGATGTAG 2196 0.4595 MSSSKYPILDNRPIHQWKVTELKEELKRRRLTTKGLKDELVRRLDEALRAEMEADETASKDDANGFEVHAGGGSEDSQTVAADVEVVQTIEEESVQTMEKGNNDNVEPTQEVETVEKGNTVVVEPIDTESTEKVQEDVDDDSKKNDKQGGVANPVDINSSVSAVDEDIEQAGLPAGVDPENVKDEQSAHGSTVETSDKITETVSTEVVVSDQHTHSEVKSNNDSTIKVENEESKAQLDNEVPKPQLECDTKPQLECDTKPPSEDLMPNTSVPENQVSEVNPSLGFQVKSDSISSDSVSINQKNELKDTIITDNVKLEQDIVRPEMVEEPSSRKDVPVSHSMDVGGLLEKKASVEENSNNVTTPDLNKINSNDDVGYPEKLNLDRSSGDDSMEEDLPESKHVDSKFDVDERDNVENIEVSIVKEESKTIVAKNDLSAGKTDTHQDIDISPVALAEKRKFNEQVSVGSNEPAKRQRRWNTETVKGPDLKSTVPRAATTPKDEPVALKRNFSRSDSTVTDDAPKERIVPPSQKPPTNSLRIDRFLRPFTLKQVQELLGKSGSITSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEFVDPQEVKMKLEPPPPPPPAAAPVSSGPAVLPTPPSSQPEPSPRMRREQPPAPATLPPPPPLSKLPPAARERLPSPPPLPEKVDPPILTLDDLFRKTTATPRIYYLPLSEEQVSARLAARSKSTRM* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy10g0904 731 MobiDBLite consensus disorder prediction 94 116 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 321 406 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 352 369 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 94 279 - -
Ahy10g0904 731 SUPERFAMILY RNA-binding domain, RBD 526 615 IPR035979 GO:0003676
Ahy10g0904 731 MobiDBLite consensus disorder prediction 263 279 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 461 534 - -
Ahy10g0904 731 CDD RRM_ACINU 533 617 IPR034257 -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 192 211 - -
Ahy10g0904 731 Gene3D SAP domain 14 59 IPR036361 -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 212 238 - -
Ahy10g0904 731 SUPERFAMILY SAP domain 14 50 IPR036361 -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 503 519 - -
Ahy10g0904 731 Pfam SAP domain 16 48 IPR003034 -
Ahy10g0904 731 SMART sap_9 14 48 IPR003034 -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 613 692 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 52 80 - -
Ahy10g0904 731 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 728 - -
Ahy10g0904 731 ProSiteProfiles SAP motif profile. 14 48 IPR003034 -
Ahy10g0904 731 Pfam RNSP1-SAP18 binding (RSB) motif 686 728 IPR032552 -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 377 406 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 129 147 - -
Ahy10g0904 731 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 728 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 321 335 - -
Ahy10g0904 731 MobiDBLite consensus disorder prediction 614 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy10g0904 Ahy-Chr10 15115364 15119396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy10g0904 K12875 - gmx:100786288 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy20g1226 20 23055596 23059674 Ahy10g0904 10 15115364 15119396 hybridization