Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2258 ATGAGACATAAATTTTCATTCCTCTACCTTGTCATTTTCTTGCTCATATTTCCGAATTCTAATTATGGCAGACCTATCACAGAACAGACACCCTCTGTGATGGTTTCTGATGGAGTCCATGACCGAAGTGAACCATCTTTTATTTACCTGAACCCAATGAGTTCATCAGATACCTGCACAGAAGCTTATGGTTTTCTGCCATGCACCACTAGTGCTCTAGGGAATGTCTTTCTCATTGTAGTATATGGCTACTTTATGTTCTTGGCTGCCAAGTCATTATCAGCTGGCAGTGAGATTTTGCTTCAAATTCTTGGTCCTGGTATCATTGGTGGCCTCTTCCTTCCTGTCTTGAGCTCTGTTCCTGATGCGACCATTATTCTTGCATCTGGACTATCTGGGAGCAAAGAAACAGCACAAAGTCAGGTCTCTGTAGGAATGGGCTTGCTAGCTGGATCAACAGTAATGCTCCTGACTATACTATGGGGTTCTTGTCTTATAGTTGGAAGGTGTGACCTTCAAAATTCAGTTGCAGTAGATCAGAAAGACACAAAAGGCTTTAACTTAGTTGAATCTGGTGTAACCACTGACATCTGGACTAGTTATGCTGCAAGGATTATGATAATATCTATCATTCCATTTGTTATTGTACAATTACCACAAATCATTCATGGAACTCCTTCAAGTCATTCAGCAGTTCTCTTTTCACTCATTGTCTCCATTTGTTTATTGGTCATTTATACCCTTTATCAGATTTTTCAGCCAAGGATTCAGAGGAGAAGACTTGCATATGTCAAGTACAAGAACTTAATGTCAGGCTTTCTAGAACAATTAAAAACACAAACAAGGGGCCGTTTCCTCAAAGACAATGGTGAACCTCACATTGAGGTCATACAAAAGTTATTTGAGTCACTTAAAAATTCTGAAGGTTACATAACTGCAAAAGACTTAAGAGCTCTCATAATAGGAATGCACTTTGAGGATGAAGACATGGTGGACATTGATGATGCTGTTCAAAGAATCATGTCAGATTTCGACAAGTCACATGACTCCAAAATTGACATGGAAGAGTTTGTTAGAGGAATAACAAGATGGCTTCAGAAAGCTGCGCGTGCCTCAACACATACGAATGACAATAGTCCCACAACACCTAAACTTCTAAACGATTTCCATCAGAGAATGAGGGCAGAACAAGACCTGTGGAGTGATCACGGGGATGAGGCCGTTGAAAGTGTCAAAAATCCAAAGTGGAACATCTTCAAAGCAGTGGTTATGTTGCTAATGGGAACTGCTGTTGCTGCTCTATATGCTGACCCCCTTGTTGATGCTGTGGACAACTTCTCAACAGCAACAAGTATTCCATCTTTCTTTGTTTCATTCGTCATCCTTCCCTTCGCTAGCTCCAGCGAGATCGTCTCAGCTCTTATCTTCGCCAGCCGGAAAAAGATCAGAACAGCATCACTGACATATTCTGAGATATATGGATCAGTGACAATGAGCAACATCCTTTCTCTATCAGTTTTCTTGGGCCTGGTTTACATTAGGAACCTGACATGGGATTTCTCAGCTGAGGTTCTTGTCATTCTGATTGTTTGCATAGTGATGGGCATGGTTGCCAGTTTCCGAACAACTTTCCCTCTATGGCTGTGTTTTCCTGCATATGCACTCTACCCATTGTCTCTACTATTGGTGTATATTCTTAATTCTGTTATTGGAATGGCCTAG 1722 0.4106 MRHKFSFLYLVIFLLIFPNSNYGRPITEQTPSVMVSDGVHDRSEPSFIYLNPMSSSDTCTEAYGFLPCTTSALGNVFLIVVYGYFMFLAAKSLSAGSEILLQILGPGIIGGLFLPVLSSVPDATIILASGLSGSKETAQSQVSVGMGLLAGSTVMLLTILWGSCLIVGRCDLQNSVAVDQKDTKGFNLVESGVTTDIWTSYAARIMIISIIPFVIVQLPQIIHGTPSSHSAVLFSLIVSICLLVIYTLYQIFQPRIQRRRLAYVKYKNLMSGFLEQLKTQTRGRFLKDNGEPHIEVIQKLFESLKNSEGYITAKDLRALIIGMHFEDEDMVDIDDAVQRIMSDFDKSHDSKIDMEEFVRGITRWLQKAARASTHTNDNSPTTPKLLNDFHQRMRAEQDLWSDHGDEAVESVKNPKWNIFKAVVMLLMGTAVAALYADPLVDAVDNFSTATSIPSFFVSFVILPFASSSEIVSALIFASRKKIRTASLTYSEIYGSVTMSNILSLSVFLGLVYIRNLTWDFSAEVLVILIVCIVMGMVASFRTTFPLWLCFPAYALYPLSLLLVYILNSVIGMA* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2258 573 SUPERFAMILY EF-hand 291 364 IPR011992 -
Aev10g2258 573 Gene3D - 288 391 - -
Aev10g2258 573 PANTHER ION BINDING PROTEIN, PUTATIVE-RELATED 3 567 - -
Aev10g2258 573 Pfam Sodium/calcium exchanger protein 421 564 IPR004837 GO:0016021|GO:0055085
Aev10g2258 573 Pfam Sodium/calcium exchanger protein 77 252 IPR004837 GO:0016021|GO:0055085
Aev10g2258 573 CDD EFh 297 362 IPR002048 GO:0005509
Aev10g2258 573 ProSiteProfiles EF-hand calcium-binding domain profile. 332 367 IPR002048 GO:0005509
Aev10g2258 573 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 3 567 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2258 Aev-Chr10 22683720 22686554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2258 34 571 EF-hand Containing Proteins AT1G53210 57.609 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2258 - - qsu:112040079 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2258 10 22683720 22686554 Aev10g1321 10 16732180 16736553 ECH
Aev10g2258 10 22683720 22686554 Aev10g2258 10 22683720 22686554 ECH