Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1321 ATGAACCTCTCTCTCATTTCCCGCCACCCCTTTCTCTTCCTCGTGGCCCTGATCCTCTGTACCCACGCCCACGCTCGCATATTCACACGCCCTTCTCATTCTTCCTCTGATCTCAGCTCTGATGGATTCAGCAGCAGCGGCGGTTCTTTCTCGGAGAACAACCTGCTTCAGCTTCCGACGGCGGATTCTTCGCCGCTGTGGTTCTTGAAGGGTGAATCGGCGTGCGAGCAGACCTACGGGTTCTTACCCTGCACCACCACGGTGGTTGGGAACTTGTTCCTGATTATAGTGTATGGGTTTCTGATGTTTAAGGCTGCGACGTACTTGTCCAATGGGAGTGAGCTTTTGCTTGAGATCTTGGGACCTGGGATCGTTGGTGGCTTGTTCCTTCCTATACTCGGTGCTTTACCTGATGCCATGCTCATTCTAGTGTCTGGGCTTTCGGGTAGCAAAGAAACTGCTCAAAGTCAGGTGTCTGTTGGAATGGGCTTGCTGGCTGGGTCGACAGTGATGCTTCTGACTTTAGTATGGGGAACCTGTGTAATTGTCGGCAAGTGTGACATCGTGAATTCAGTTGCATTAGATTCACAAGACACTAGGGGATTCAGTTTAACTGGTTCTGGTGTTAGTACTGATATCTGGACCAGTTATGCTGCAATGATTATGGCTGTATCTGTGCTTCCATTTCTGATTGTTCAATTACCACAAATTCTCAACTCAACTTCAGGAAGGCACTTAGCAGTTTTGATTGCTCTTATCGTCTCTCTATGTTTATTGGTTGCTTATTGCCTTTACCAGGTTTTCCAGCCCTGGATACAAAAGAGAAAACTTGAATACGTTAGACACAAGCATGTTATTTTAGGACTTTTGAGACATTTGAAGCAGCGTGCATTGGGAAGGCTGCTCAAAGACAATGGTGAGCCTGACGAAGAAGTTATAAGAAAGTTGTTTGCAACAATTGATGAAAACAAAGATGGCAGTCTTACTCATGGTGAGTTGAGGGCACTAGTGGTCGGAATTCGATTCGAGGAGGTTGACTTGGATCATGATGATGCTGTAAAAAGAATAATGGTGGACTTCGATACTTCTCGCGATCAGGTTGTAGATGAAAATGAATTTGTAAATGGTGTCTGTAAATGGCTTCAGAGAGCCAGTCGTTCTCGACCTGCATCTGGTGATGCTGGTCCACACACAGTGAAGTTTTTAAGCGATTTCCACTTGGAAACAAAGAGGGAACATGATCTCTTGGATGTGGGGGGTCAAAGTGAAGAAGCTGCCGAGGGTGTTGAGAATGCTAAATGGACCTCCATCAAGGCAGTGCTGCTGCTTCTACTGGGAACTGTTATTGCTGCAGCATTCGCCGATCCTCTGGTTGATGCAGTTGATAACTTCTCTGACGCTACAAGCATTCCTGCTTTCTTCATTTCTTTCATTTTTCTGCCTTTGGCAACCAACTCAAGTGAAGCAGTGTCCGCAATCATTTTTGCCAGTCGCGATAAGAGGCAAACCGCCTCATTAACATTTTCAGAGCTATATGGGGCAGTGACAATGAATAATGTGCTATGCCTATCAGTGTTCTTAGCATTGGTGTATGTGAGGGGATTGACATGGGACTTCTCCTCAGAAGTGTTGGTTATTCTGTTGGTTTGCATTGTGATGGGTCTCCTTGGCAGTCTCCGCACTTGTTTCCCTCTATGGACATCCCTTTTGGCCATCTTGCTCTATCCTCTCTCCCTTGCATTGGTCTATGTTCTTGATTACATCTTTGGTTGGTCATAG 1779 0.4615 MNLSLISRHPFLFLVALILCTHAHARIFTRPSHSSSDLSSDGFSSSGGSFSENNLLQLPTADSSPLWFLKGESACEQTYGFLPCTTTVVGNLFLIIVYGFLMFKAATYLSNGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKETAQSQVSVGMGLLAGSTVMLLTLVWGTCVIVGKCDIVNSVALDSQDTRGFSLTGSGVSTDIWTSYAAMIMAVSVLPFLIVQLPQILNSTSGRHLAVLIALIVSLCLLVAYCLYQVFQPWIQKRKLEYVRHKHVILGLLRHLKQRALGRLLKDNGEPDEEVIRKLFATIDENKDGSLTHGELRALVVGIRFEEVDLDHDDAVKRIMVDFDTSRDQVVDENEFVNGVCKWLQRASRSRPASGDAGPHTVKFLSDFHLETKREHDLLDVGGQSEEAAEGVENAKWTSIKAVLLLLLGTVIAAAFADPLVDAVDNFSDATSIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSELYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILLVCIVMGLLGSLRTCFPLWTSLLAILLYPLSLALVYVLDYIFGWS* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1321 592 ProSitePatterns EF-hand calcium-binding domain. 361 373 IPR018247 -
Aev10g1321 592 Gene3D - 121 290 IPR044880 -
Aev10g1321 592 Gene3D - 428 586 IPR044880 -
Aev10g1321 592 PANTHER SODIUM/CALCIUM EXCHANGER NCL 14 589 - -
Aev10g1321 592 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 14 589 IPR004713 GO:0006812|GO:0008324|GO:0016021
Aev10g1321 592 ProSitePatterns EF-hand calcium-binding domain. 321 333 IPR018247 -
Aev10g1321 592 Gene3D - 291 403 - -
Aev10g1321 592 Pfam EF-hand domain pair 310 375 IPR002048 GO:0005509
Aev10g1321 592 Pfam Sodium/calcium exchanger protein 439 583 IPR004837 GO:0016021|GO:0055085
Aev10g1321 592 Pfam Sodium/calcium exchanger protein 93 269 IPR004837 GO:0016021|GO:0055085
Aev10g1321 592 SUPERFAMILY EF-hand 307 381 IPR011992 -
Aev10g1321 592 ProSiteProfiles EF-hand calcium-binding domain profile. 308 343 IPR002048 GO:0005509
Aev10g1321 592 SMART efh_1 352 380 IPR002048 GO:0005509
Aev10g1321 592 SMART efh_1 312 340 IPR002048 GO:0005509
Aev10g1321 592 CDD EFh 313 377 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1321 Aev-Chr10 16732180 16736553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1321 23 592 EF-hand Containing Proteins AT1G53210 66.608 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1321 - - gmx:100809896 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2258 10 22683720 22686554 Aev10g1321 10 16732180 16736553 ECH
Aev10g1321 10 16732180 16736553 Aev10g1321 10 16732180 16736553 ECH