Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2110 ATGGAGGATTCCCGCATATTTTTTTGCATTTTCATACTCCTCTTCGCCGTGGCATTCTCGGTAAACCCCACCCCGAGGCTGTCGGTGTCTTCACCATCGTCGACGAGTCAGATCAACTCTAACTCAGTCCTGGTGGCACTCCTCGACTCGCACTACACCGAACTCGCAGAGCTGGTGGAAAAAGCCATGCTCCTCCAAACACTCGAACACGCCGTCGCTACCCACAACATCACAATCTTCGCACCCGCAAACGATGCCTTAGAGCGCAACCTCGACCCTCTCTTCAAGCGCTTCCTCCTCCAGCCGGGAAATCTCCACTCCCTCCAGACCCTCCTTCTCTCCCACATCGTTCCAACCCGAATCGGCTCCGAATCCACTTCTGGCTCAACCCGACACCAAACCCTCTCAAACGACTTCCTCACCCTCGCGACTAACTCAACCACAAAACAATGGACCGTGGACCGGGTCGGGATTACCCATCCGGATGCAATAACCCGACCCGATGGAGTCATCCACGGGATCGACCGTTTACTCGTCCCGCGCTCCGTCCAGGATGACTTCAACCGCCGCCGCAGCCTCAGCTCCATCGCCGCCGTCAAACCCGAAGGCGCACCGGAAATAGACCCCAGACTCCACCGGTCTAAGAAGCTCGATTCGAAGGAAAATCACCCTGCTGGATCCCCGCCGGAGCTCCCGATCTACTACGCATTAGCCTCGGCACCGTCCCTAGCTCCGGCGTCGGCGCCGTCACCCGGTGGGCCACACCGTCACTTTGATGGCGAGTCTCAGGTGAAGGACTTCATCCAATCACTCCTCCACTACGGCGGTTACAACGAGATGGCGGACATTCTTGTAAACCTAACGTCGTTGGCGACCGAAATGGGTCGTTTGGTTTCCGAAGGTTACGTTCTGACGGTCCTGGCGCCGAACGACGAGGCCATGGCGAAGCTCACGACGGAGCAGCTGAGTGAACCGGGTGCGCCGGAGCAGATAATGTACTACCACTTAATACCGGAGTACCAAACGGAGGAGAGCATGTACAATGCGGTTAGAAGGTTCGGGAAGGTTCGGTATGATACGCTGAGGTTGCCGCATAAGGTGGTGGCTCAGGAGGCTGATGGGTCGGTTCGGTTCGGGAAGGGTGACGGGTCGGCTTATTTGTTCGACCCGGATATTTACACTGATGGAAGGATCTCGGTTCAGGGGATTGATGGGGTTTTGTTTCCAGAGGAGGAGGAGGAGTTGGACCGGGTTAAACCGGTTAACCGTACGGTTCAACCCGGAAAGGTCGTTGTCAAGCATAGGAGAGGAAAATTGCTGGAAGCAGCATGCTGGATGCTTGGAACCGTTGGACAGCATTCTAGATTCACCTCTTGTCAGTGA 1383 0.5618 MEDSRIFFCIFILLFAVAFSVNPTPRLSVSSPSSTSQINSNSVLVALLDSHYTELAELVEKAMLLQTLEHAVATHNITIFAPANDALERNLDPLFKRFLLQPGNLHSLQTLLLSHIVPTRIGSESTSGSTRHQTLSNDFLTLATNSTTKQWTVDRVGITHPDAITRPDGVIHGIDRLLVPRSVQDDFNRRRSLSSIAAVKPEGAPEIDPRLHRSKKLDSKENHPAGSPPELPIYYALASAPSLAPASAPSPGGPHRHFDGESQVKDFIQSLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVRFGKGDGSAYLFDPDIYTDGRISVQGIDGVLFPEEEEELDRVKPVNRTVQPGKVVVKHRRGKLLEAACWMLGTVGQHSRFTSCQ* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2110 460 Pfam Fasciclin domain 289 409 IPR000782 -
Aev10g2110 460 Pfam Fasciclin domain 51 180 IPR000782 -
Aev10g2110 460 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 13 460 IPR044654 -
Aev10g2110 460 SUPERFAMILY FAS1 domain 40 181 IPR036378 -
Aev10g2110 460 Gene3D FAS1 domain 43 181 IPR036378 -
Aev10g2110 460 SUPERFAMILY FAS1 domain 243 410 IPR036378 -
Aev10g2110 460 Gene3D FAS1 domain 259 410 IPR036378 -
Aev10g2110 460 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 13 460 - -
Aev10g2110 460 SMART fasc_3 305 410 IPR000782 -
Aev10g2110 460 SMART fasc_3 78 181 IPR000782 -
Aev10g2110 460 MobiDBLite consensus disorder prediction 205 223 - -
Aev10g2110 460 MobiDBLite consensus disorder prediction 198 231 - -
Aev10g2110 460 ProSiteProfiles FAS1/BIgH3 domain profile. 264 392 IPR000782 -
Aev10g2110 460 ProSiteProfiles FAS1/BIgH3 domain profile. 39 178 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2110 Aev-Chr10 21831239 21833150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2110 - - gmx:100815434 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2110 10 21831239 21833150 Aev04g2775 04 27587280 27590037 PCT