Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2775 ATGGATTCTCACATCCATGGCACCACCATCTTCACCTTCTTCCTCCTCCTCCTCCTCTCTCCAGCCACGTTCTCATCATCATCGTCGTCACCATCAACGGCTCAGATCAACTCAAACTCCATCCTCGTTGCTCTTCTTGACTCACATTACACAGAACTAGCAGAACTGGTGGAAAAAGCCATGCTTTTGCAGACACTAGAAGAAACCGTGGCAAAAAACAACATCACAATCTTCGCACCCAAGAACGAAGCATTGGAGCGCGATCTCGACCCTGAATTCAAGCGCTTCCTTCTCGAACCACGAAACCTCAAGTCCCTACAGACACTAATCATGTCTCACATCGTCCCGACCCGAATCGGATCCGAAAACAGACCCGGGTTGACCCGGCTCCAAACCCTCGCCGGCGACTACCACCACCTCCAAGTCAACCGCAATTCCACCATCACCACGGCGGCCAGTTCCGTCACAATCGACGGCGCCCAGGTCACTCACCCGGAAACCCTAACCCGACCCGACGGAGTTATCCACGGAATCGAGCGCCTCCTGATCCCACGCTCCGTCCAATCGGACTTCAGCAACCGCCGTAGCCTCCGCTCAATCGCCGCCGTGAAGCCGGAGGGAGCGCCGGAGGTTGACCCGAGGACCCACCGGCTGAAAAAATCAGCACCTCCATCAAAACCTGGCTCTCCTCCGGCGCTCCCGATCTACGACGCGATGGCGCCGGGACCCGCCATAGCTCCAGCACCGGCACCAGGACCTGGCGGCAAGCACCACCACTTCGACGGCGAGGCCCAAGTAAAGGACTTCATCCACACACTCCTCCATTACGGCGGTTACAACGAAATGGCCGATATCCTCGTGAACCTAACGTCGTTAGCAACAGAAATGGGTCGTTTAGTGTCAGAAGGCTACGTTCTCACCGTTTTGGCACCAAACGACGAAGCAATGGCAAAATTAACGACAGAACAATTGAGTGAACCGGGTGCACCGGAGCAGATAATGTACTATCACTTGATCCCGGAGTACCAAACGGAGGAATCGATGTACAATGCGGTTAGAAGGTTCGGGAAGGTTCGGTACGATACGCTTAGGGTTCCGCACAAGGTTGTGGCGGAAGAGGGTGATGGGTCGGTTCGGTTCGGGCATGGGGACGGGTCAGCGTATTTGTTTGACCCGGATATTTACACTGATGGGAGGATCTCTGTTCAGGGAATTGATGGAGTGTTGCTTCCGCCGGAGGAGGAGAAGGTTGATTCGGGTCGGGTTGTGAAGTCAGGTCAACCCGGGAAGGTTGTGGTTAAGCAGAGGAGAGGAAAATTGCTGGAAGCAGCATGCTGGATGCTTGGAACTTTTGGACAGCATTCTAGATTTGCCTCTTGCCATTAA 1386 0.5455 MDSHIHGTTIFTFFLLLLLSPATFSSSSSSPSTAQINSNSILVALLDSHYTELAELVEKAMLLQTLEETVAKNNITIFAPKNEALERDLDPEFKRFLLEPRNLKSLQTLIMSHIVPTRIGSENRPGLTRLQTLAGDYHHLQVNRNSTITTAASSVTIDGAQVTHPETLTRPDGVIHGIERLLIPRSVQSDFSNRRSLRSIAAVKPEGAPEVDPRTHRLKKSAPPSKPGSPPALPIYDAMAPGPAIAPAPAPGPGGKHHHFDGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRVPHKVVAEEGDGSVRFGHGDGSAYLFDPDIYTDGRISVQGIDGVLLPPEEEKVDSGRVVKSGQPGKVVVKQRRGKLLEAACWMLGTFGQHSRFASCH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2775 461 ProSiteProfiles FAS1/BIgH3 domain profile. 266 394 IPR000782 -
Aev04g2775 461 Gene3D FAS1 domain 285 412 IPR036378 -
Aev04g2775 461 ProSiteProfiles FAS1/BIgH3 domain profile. 37 182 IPR000782 -
Aev04g2775 461 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 460 IPR044654 -
Aev04g2775 461 SUPERFAMILY FAS1 domain 39 185 IPR036378 -
Aev04g2775 461 SMART fasc_3 76 185 IPR000782 -
Aev04g2775 461 SMART fasc_3 307 412 IPR000782 -
Aev04g2775 461 MobiDBLite consensus disorder prediction 202 244 - -
Aev04g2775 461 Pfam Fasciclin domain 291 411 IPR000782 -
Aev04g2775 461 Pfam Fasciclin domain 49 184 IPR000782 -
Aev04g2775 461 Gene3D FAS1 domain 41 185 IPR036378 -
Aev04g2775 461 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 460 - -
Aev04g2775 461 SUPERFAMILY FAS1 domain 244 413 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2775 Aev-Chr4 27587280 27590037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2775 - - adu:107477699 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2110 10 21831239 21833150 Aev04g2775 04 27587280 27590037 PCT