Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2047 ATGTCTAAGATGTCTGTGCTCTTGGGGTTCTTCGTGGGTCTAGTGTTGGTGGGCTCTGTTGCCTCTTCCAGCTTTGAACAACTCTTCCAGCCCGGTTGGGCCTTCGACCATTTCGTCCATGATGGAGAACTCCTCAAACTCAAACTAGATAACTATTCTGGTGCTGGATTTGGATCCAAAAGCAAGTATATGTTTGGGAAGGTGACTATCCAGCTCAAGCTTGTGGAGGGTGACTCTGCTGGAACCGTTACTGCTTTCTATATGTCATCAGAGGGTCCAAATCACAACGAATTTGATTTTGAGTTTTTGGGCAACACTACTGGAGAGCCTTACTCGGCTCAGACCAACGTTTATGTGAATGGTATTGGTAACAGAGAGCAGAGGCTCAACCTTTGGTTTGACCCCACCAAGGACTTCCACAACTACTCCATCTTCTGGAATCAGCGCCAAGTTGTGTTCCTAGTGGATGATACGCCAATAAGGGTGCACACAAACTTGGAGCACAAGGGGATCCCATTCCCGAAAGACCAGGCAATGGGAGTGTACAGCTCAATATGGAACGCAGATGATTGGGCGACACAGGGTGGTCGGGTGAAGACAGATTGGAGCCATGCGCCGTTCATTGCGACCTACAAGGACTTCGAGATTAACGCGTGCGAGTGCCCCACGGCAGTGGCATCGTCGGACCCAGAAAACGCCAAGAGGTGCAGCAGCAGCGAGGATAAGAAGTATTGGTGGGACGAGCCCACGCTGTCGGAGCTAAGCCTGCACCAGACCCACCAGCTTATGTGGGTTAGGGCCAACCATATGGTCTATGACTATTGCACTGACTCTGCTAGGTTCCCCGTCACTCCTGCTGAGTGCGTCCACCACCGTCACTAG 882 0.5125 MSKMSVLLGFFVGLVLVGSVASSSFEQLFQPGWAFDHFVHDGELLKLKLDNYSGAGFGSKSKYMFGKVTIQLKLVEGDSAGTVTAFYMSSEGPNHNEFDFEFLGNTTGEPYSAQTNVYVNGIGNREQRLNLWFDPTKDFHNYSIFWNQRQVVFLVDDTPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIATYKDFEINACECPTAVASSDPENAKRCSSSEDKKYWWDEPTLSELSLHQTHQLMWVRANHMVYDYCTDSARFPVTPAECVHHRH* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2047 293 Pfam Glycosyl hydrolases family 16 29 203 IPR000757 GO:0004553|GO:0005975
Aev10g2047 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 12 291 - -
Aev10g2047 293 PIRSF EndGlu_transf 1 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev10g2047 293 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 23 211 IPR000757 GO:0004553|GO:0005975
Aev10g2047 293 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 292 IPR013320 -
Aev10g2047 293 CDD GH16_XET 21 288 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev10g2047 293 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 241 288 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aev10g2047 293 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 12 291 IPR044791 GO:0004553
Aev10g2047 293 Gene3D - 14 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2047 Aev-Chr10 21457997 21459916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2047 55 293 Glycoside Hydrolase AT4G03210 76.151 1.36e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2047 K08235 - gmx:100801567 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2047 10 21457997 21459916 Aev10g2047 10 21457997 21459916 ECH
Aev04g2690 04 26681891 26685893 Aev10g2047 10 21457997 21459916 PCT