Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2690 ATGTCTAAGGTTTGTTCTGGATTGTTTGTGGGTCTTATGTTGTTGGTTGGAGTGGCTTTTGCTGCAAAGTTTGATGAACTTTTCCAACCAAGTTGGGCTCACGACCATTTCATTCATGAAGGAGACCTTCTAAAACTCAAGCTTGATTACTATTCCGGTGCTGGTTTTGGATCCAAAAGCAAGTATATGTTTGGGAAAGTAACCGTGCAGCTTAAGCTTGTGGAAGGTGATTCTGCTGGCACGGTTACTGCTTTCTATATGTCATCAGAGGGTTCGAATCACAACGAATTTGATTTTGAGTTCCTGGGGAACAGCACAGGGGAACCTTACTCTGTGCAGACGAACGTGTATGTGAATGGAGTGGGAAACAGAGAGCAAAGGCTAGACCTTTGGTTCGACCCTACCAAAGACTTCCATTACTACTCTATCTTTTGGAATCAACGTCAAGTTGTATTTCTAGTGGACGAAACACCAATAAGAGTACACACAAACATGGAACACAAGGGAATCCCTTTCCCGAAGGACCAAGCAATGGGAGTGTACAGCTCAATATGGAACGCTGATGATTGGGCAACACAAGGTGGTCGTGTTAAGACCGATTGGAGCCACGCACCATTCATTGCAACATACAAGTCATTTGAGATCAATGCTTGTGAGTGCCCTGTTTCTACAGCCTCAATGGACAATGCAAAGAGGTGCAGTAGCAGCGAGGACAAGAAGTTTTGGTGGGATGAGCCTCATTTGTCTGAACTAAGCTTGCATCAGACTCACCAGCTTATGTGGGTTAGGGCCAAACATATGCTTTATGATTATTGCTCTGACTCTGCTAGGTTCCCTGTTATACCTGCTGAGTGTGTTCATCACACTCACCACCAGTAG 879 0.4471 MSKVCSGLFVGLMLLVGVAFAAKFDELFQPSWAHDHFIHEGDLLKLKLDYYSGAGFGSKSKYMFGKVTVQLKLVEGDSAGTVTAFYMSSEGSNHNEFDFEFLGNSTGEPYSVQTNVYVNGVGNREQRLDLWFDPTKDFHYYSIFWNQRQVVFLVDETPIRVHTNMEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFIATYKSFEINACECPVSTASMDNAKRCSSSEDKKFWWDEPHLSELSLHQTHQLMWVRAKHMLYDYCSDSARFPVIPAECVHHTHHQ* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2690 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 8 289 IPR044791 GO:0004553
Aev04g2690 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 239 285 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Aev04g2690 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 289 IPR013320 -
Aev04g2690 292 Pfam Glycosyl hydrolases family 16 27 202 IPR000757 GO:0004553|GO:0005975
Aev04g2690 292 PRINTS Glycosyl hydrolase family 16 signature 130 147 IPR008264 GO:0004553|GO:0005975
Aev04g2690 292 PRINTS Glycosyl hydrolase family 16 signature 54 72 IPR008264 GO:0004553|GO:0005975
Aev04g2690 292 PRINTS Glycosyl hydrolase family 16 signature 112 125 IPR008264 GO:0004553|GO:0005975
Aev04g2690 292 Gene3D - 14 290 - -
Aev04g2690 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 8 289 - -
Aev04g2690 292 PIRSF EndGlu_transf 1 290 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev04g2690 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 22 210 IPR000757 GO:0004553|GO:0005975
Aev04g2690 292 CDD GH16_XET 21 285 IPR016455 GO:0010411|GO:0016762|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2690 Aev-Chr4 26681891 26685893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2690 54 290 Glycoside Hydrolase AT4G03210 74.684 9.20e-139 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2690 K08235 - gmx:100801567 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2690 04 26681891 26685893 Aev10g2047 10 21457997 21459916 PCT