Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2025 ATGGCTGCTCTTACTTCTCTGTCTTTCTCAGCAATCACTCATCAGTGTTGTGAAAGAAAAGCTACTCTTTCATCATCCTCCACTCGTTTCTTTGGGATTAGGACCAATTTCTCGTACCATTATGGCTGTGTTAGAGCTTCTAATCCAGCATCTAGAATGGTTGTTCAATGCATGTCCTCTGTAACAGATCCTCCCACTGTTTCTGAGACAAAACTGAATTTCCTCAAGGCATATAAGACACCAATCCCTAGTATCTACAACACTGTGCTGCAGGAGCTTATTGTCCAGCAACATTTGATGAGGTATAAGAGATCATACCGCTATGATCCGGTATTTGCTCTTGGATTCGTCACGGTATATGATCGACTCATGGAAGGGTATCCTAGTAATGAAGACCGAGATGCCATCTTCCAAGCATATATCAAGGCATTGAATGAAGATCCAGAACAATACAGAATAGATGCACAGAAATTGGAGGAGTGGGCTAAGGCGCAAAACTCAACTTCCCTGATTGAGTTTTCATCCAAAGAAGGAGAAGTTGAGGGGATTTTAAAGGACATTGCAGAGAGAGCAGGAGGAAAGGGAGATTTCAGTTACAGTCGTTTCTTTGCAGTCGGCCTCTTTCGTCTTCTTGAGTTGGCAAATGCGACAGAACCAACAATTCTGGAAAAGCTTTGTGCGGCTTTAAACATCAACAAGAAAAGTGTCGACCGGGACTTGGATGTGTATCGCAATCTGCTTTCCAAGTTGGTTCAAGCGAAGGAGCTGCTGAAGGAGTATGTTGACAGGGAGAAGAAGAAAAGGGAAGAAAGGGGTGAACCACAAAAGGCTAATGAGACCATTACAAAATGA 852 0.4308 MAALTSLSFSAITHQCCERKATLSSSSTRFFGIRTNFSYHYGCVRASNPASRMVVQCMSSVTDPPTVSETKLNFLKAYKTPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDRLMEGYPSNEDRDAIFQAYIKALNEDPEQYRIDAQKLEEWAKAQNSTSLIEFSSKEGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANATEPTILEKLCAALNINKKSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERGEPQKANETITK* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2025 283 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 282 - -
Aev10g2025 283 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 62 268 IPR017499 GO:0010207|GO:0015979
Aev10g2025 283 Coils Coil 243 270 - -
Aev10g2025 283 Pfam Thylakoid formation protein 66 271 IPR017499 GO:0010207|GO:0015979
Aev10g2025 283 MobiDBLite consensus disorder prediction 263 283 - -
Aev10g2025 283 MobiDBLite consensus disorder prediction 263 277 - -
Aev10g2025 283 Hamap Protein Thf1 [thf1]. 61 269 IPR017499 GO:0010207|GO:0015979
Aev10g2025 283 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 282 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2025 Aev-Chr10 21335955 21338095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2025 - - gmx:100814341 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2025 10 21335955 21338095 Aev10g2025 10 21335955 21338095 ECH
Aev10g2025 10 21335955 21338095 Aev04g2521 04 25026288 25029875 PCT