Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2521 ATGGCAGCTGTTACTTCTTCTCTCTCTCTCTCTACACTCACACAGTGCTCGCAGAATAAACTATCCCTCTCTTCAACTCGTTTTCTGGGACCCAATTCCGAGCCATTTCGGCTGAAACTGAATTTCTCGTCCTACCATCTTGGCGTTCGAGCTTCCAATTTGGGCTCTAGAATGGTTGTTCGGTGCTCCTCTTCCGCGTCAGACCTTCCTACTGTATCCGAGACAAAGTTAAACTTTCTCAAGGCATATAAGCGACCTATCCCTAGTATCTACAACACTGTGCTGCAGGAGCTGATTGTCCAGCAACATTTGATGAGATACAAGAGATCATACTGCTATGACCCTGTATTTGCTCTTGGTTTTGTCACTGTATATGACCAACTCATGGAAGGTTATCCTAGTGATGAGGACCGCGATGCCATCTTCCAAGCATACATTAAAGCATTGAAGGAAGATCCGGAACAATACAGAGTTGATGCACAGAAGTTGGAAGAGTGGGCACGGACTCAAAACTCAACATCCCTGGTTGAGTTTTCATCCAGAGAAGGAGAAGTTGAAGGGATCTTAAAGGATATTGCAGAAAGAGCAGGAGGAAAGGGGGATTTCAGCTATAGTCGATTCTTTGCAATTGGCCTTTTTCGTCTTCTTGAGTTGGCGAATGCGATGGAGCCAACAATTTTGGAAAAGCTTTGTGCAGCTTTGAACGTCAGCAAAAGAAGTGTTGATAGGGACTTGGATGTCTACCGTAATCTGCTTTCTAAGTTGGTTCAAGCTAAAGAGCTGCTAAAGGAATATGTTGACAGGGAGAAAAAGAAAAGAGAAGAAAGGGCTGAACCACAAAAGGCTAATGAGGCCATCACAAAATGTTTAGGACAAGAGCAATTTTCTGGCCTGTAG 897 0.4415 MAAVTSSLSLSTLTQCSQNKLSLSSTRFLGPNSEPFRLKLNFSSYHLGVRASNLGSRMVVRCSSSASDLPTVSETKLNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYCYDPVFALGFVTVYDQLMEGYPSDEDRDAIFQAYIKALKEDPEQYRVDAQKLEEWARTQNSTSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAIGLFRLLELANAMEPTILEKLCAALNVSKRSVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKREERAEPQKANEAITKCLGQEQFSGL* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2521 298 PANTHER PHOTOSYSTEM II BIOGENESIS PROTEIN 1 287 - -
Aev04g2521 298 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 287 IPR017499 GO:0010207|GO:0015979
Aev04g2521 298 Coils Coil 248 278 - -
Aev04g2521 298 Pfam Thylakoid formation protein 71 276 IPR017499 GO:0010207|GO:0015979
Aev04g2521 298 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 69 273 IPR017499 GO:0010207|GO:0015979
Aev04g2521 298 Hamap Protein Thf1 [thf1]. 66 274 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2521 Aev-Chr4 25026288 25029875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2521 - - aip:107632658 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2521 04 25026288 25029875 Aev04g2521 04 25026288 25029875 ECH
Aev10g2025 10 21335955 21338095 Aev04g2521 04 25026288 25029875 PCT