Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2012 ATGAGGAGAAGAGCTCAGGATTTTCGGCGGCCAGTGAGGAGGAGGGTTCCTGATGCGTTTTGGTGGGCATTGTGCTGTGCTGTTGTTCTTCTCTTTATCTATATTCTCAGCAAAGGGAACCAGATTGAGTCTAGACCAGCTTCGTCCAAGAGAACTTACAAGAATGAAAAGATCATGGAAGGCCTTAATATTACTGAAGAGATGTTAAGCTCTAACTCAGTGACCAGACAACTGAATGATCAGATATCCCTAGCAAAAGCTTTTGTTGTGATTGCAAAAGAAAGCAACAATTTACAATTTGCTTGGGAATTAAGTGCCCAGATCCGCAATTCACAGATTCTTCTCTCAAATGCTGCCACTAGGCGTGTTCCTTTATCTATCAGGGAATCAGAAAGTGCCATCCGTGATATGGCATTATTGTTATACCAGGCTCAGCAACTCCACTATGACAGTGCAACCATGATCATGAGATTCAAAGCAAAAATACAAGCTCTTGAAGAGCAGATGAATTCTGTAAGTGAAAAGAGTTCAAAATATGGACAGATAGCTGCTGAGGAAGTCCCAAAGAGCCTATACTGTCTTGGTGTCCGGTTGGCCACAGAATGGTTCCAAAACCTTAATCTGCAAAAGAAATTGAAGGAAAAAAGGCAAGTGGAGATGAAACTCAAGGATAGCAATCTTTACCACTTCTGTGTGTTCTCTGATAACATCCTTGCAACTTCAGTTGTGGTCAATTCAACTGCGATAAATTCTAAACATCCTGATATGATTGTTTTCCACCTTGTCACCGATGAAATAAATTATGCGGCAATGAAGGCATGGTTCGCCATGAATGATTTCCGTGGGGTGACAGTGGAAGTTCAAAAGTTTGAAGACTTCACTTGGTTAAATGCTTCGTACGTTCCTGTGCTCAAGCAACTTCAGGACTCAGAAACACAGAGCTACTACTTTTCTGGCAGCAGTGGTGATGGGAGGACGCCCATCAAGTTCCGTAACCCTAAATATCTATCCATGCTTAACCACCTAAGGTTTTATATCCCTGAAGTTTTCCCTGCACTAAAGAAGGTGGTGTTCCTGGACGACGATGTGGTGGTTCAGAAGGATCTCTCTGGTCTTTTTTCTATTGATTTGAATGGCAATGTTAATGGAGCTGTTGAGACATGCATGGAGACATTTCATCGATACCACAAATACTTGAACTACTCCCATCCTCTCATCCGCTCGCATTTCGATCCTGATGCTTGTGGATGGGCATTTGGCATGAATGTCTTTGATTTGGTTGAATGGAGGAAGAAGAACGTAACCGGCATCTACCACTACTGGCAGGATAAGAATGTAGACAGAACATTGTGGAAACTCGGTACGTTGCCGCCTGGACTACTGACTTTCTATGGATTGACTGAGCCTTTGGATCCATCATGGCATGTATTGGGATTTGGCTACACCAATGTTGATCCTCAGTTGATAGAGAGAGGGGCAGTGCTGCATTTCAATGGGAACTCCAAACCATGGCTCAAGATTGGGATTGAGAAGTACAAGCCCCTTTGGGAAAGATTTGTTGATTACTCTCATCCTTTATTGCAGCAGTGCAATTTCCATTGA 1602 0.4295 MRRRAQDFRRPVRRRVPDAFWWALCCAVVLLFIYILSKGNQIESRPASSKRTYKNEKIMEGLNITEEMLSSNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRVPLSIRESESAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLATEWFQNLNLQKKLKEKRQVEMKLKDSNLYHFCVFSDNILATSVVVNSTAINSKHPDMIVFHLVTDEINYAAMKAWFAMNDFRGVTVEVQKFEDFTWLNASYVPVLKQLQDSETQSYYFSGSSGDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRSHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQDKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWERFVDYSHPLLQQCNFH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2012 533 CDD GT8_like_1 228 521 - -
Aev10g2012 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 533 IPR029993 GO:0047262
Aev10g2012 533 Pfam Glycosyl transferase family 8 235 507 IPR002495 GO:0016757
Aev10g2012 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 525 IPR029044 -
Aev10g2012 533 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 3 533 - -
Aev10g2012 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Aev10g2012 533 Coils Coil 155 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2012 Aev-Chr10 21282405 21284816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2012 1 533 Glycosyltransferase AT2G20810 81.530 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2012 K13648 - gmx:100792018 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2012 10 21282405 21284816 Aev10g2012 10 21282405 21284816 ECH
Aev10g2012 10 21282405 21284816 Aev04g2534 04 25169880 25173386 PCT