Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g2534 ATGAGACGAAGATCCGTGGATTTTCGAAGGCCAGTGAGGAGGAGTGTTCAGGATGTGGTATGGTGGACACTCTGTAGCGTAGTGATTCTCTTCTTTATTTATATTCTCACCACCAAAGGCACCACAACCAACTCTGACTCAACACCCAAATTCTCCAAGAGAAATTTCAGGAATGATCGGATTATGGAAGGCGTTAATATTACTGAAGAGATGTTAAGCCCTAACTCAGTGGCCAGACAACTAAATGATCAGATATCCCTGGCAAAATCTTTTGTTGTAATTGCCAAAGAAAGTAACAATCTCCAATTTGCTTGGGATTTAAGCACCCAGATTCGCAATTCACAGATTCTCCTCTCCAATGCTGCCACTAGGCGTGCTCCTTTAACAATAATGGAATCCGATGGTGCAATTCGCGATATGGCATTATTGCTATTTCAGGCACAGCAGCTCCATTACGATGGTGCAAGCATGATAATGAGACTGAAGGCAAGAGTTCAGACCCTTGAAGAACAGATGAATTCTGTAACTGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCCAAGAGCCTATACTGCCTTGGTGTCCGGTTGACATCGAAATGGTTCAATGATGATTTCGATTTGCAGAAGAAATTGAACGGCAAAATGCAAGCGGAGATGAAACTTAAGGATAACAATCTTTACCACTTCTGTGTGTTCTCTGATAATATCCTTGCTTCTTCAGTTGTAGTCAATTCGACAGCAATAAATTCCAAAAATCCAGAAAAGATTGTTTTCCACCTTGTCACCGATGAAATAAATTATGCCTCGATGAAGGCGTGGTTCACATTGAATGATTTTCGCGGGGTGACCGTTGAGGTTCAAAAGTTCAAAGACTTCACTTGGTTAAATGCTTCATATGTTCCTGTGCTAAAGCAACTTCAGGACTCAGAAGTACAGAGCTATTACTTCAGAGGCAGTAACGATGATGGCATGACCCCCATCAAGTTCCGTAACCCGAAATACCTATCCATGCTCAACCACCTGAGGTTCTACATCCCGGAAGTCTTTCCTGCACTGAAGAAGGTGGTGTTCCTGGACGACGATGTTGTGGTTCAGAAGGATCTTTCTGAACTCTTCTCCATTGATTTGAATGGCAATGTTAATGGGGCTGTTGAGACTTGCATGGAGACATTTCATAGGTACCATAAATACTTGAACTACTCACACCCCCTTATAAGGTCACATTTTGACCCTGATGCTTGTGGTTGGGCATTTGGTATGAATGTGTTTGATTTGGTTCAATGGAGGAAGAGAAATGTGACAGGAATCTACCACTACTGGCAGGAGAAGAATGCTGATAGGACATTGTGGAAACTTGGCACCTTGCCTCCTGGATTGTTAACTTTTTATGGTTTGACTGAGCCATTGAACCCATTATGGCATGTTTTGGGTTTTGGCTACACAAATGTTGATCCTCGGTTGATAGAGGAGGGTGCTGTCTTGCACTTCAATGGGAACTCAAAACCTTGGTTGAAGATTGGTATGGAAAAGTACAAGCCTATTTGGGAAAAGTTTGTGGATTATTCTCACCCTTTGTTGGAACAGTGCAATTTTCACTGA 1614 0.4219 MRRRSVDFRRPVRRSVQDVVWWTLCSVVILFFIYILTTKGTTTNSDSTPKFSKRNFRNDRIMEGVNITEEMLSPNSVARQLNDQISLAKSFVVIAKESNNLQFAWDLSTQIRNSQILLSNAATRRAPLTIMESDGAIRDMALLLFQAQQLHYDGASMIMRLKARVQTLEEQMNSVTEKSSKYGQIAAEEVPKSLYCLGVRLTSKWFNDDFDLQKKLNGKMQAEMKLKDNNLYHFCVFSDNILASSVVVNSTAINSKNPEKIVFHLVTDEINYASMKAWFTLNDFRGVTVEVQKFKDFTWLNASYVPVLKQLQDSEVQSYYFRGSNDDGMTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSELFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRSHFDPDACGWAFGMNVFDLVQWRKRNVTGIYHYWQEKNADRTLWKLGTLPPGLLTFYGLTEPLNPLWHVLGFGYTNVDPRLIEEGAVLHFNGNSKPWLKIGMEKYKPIWEKFVDYSHPLLEQCNFH* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g2534 537 Pfam Glycosyl transferase family 8 239 511 IPR002495 GO:0016757
Aev04g2534 537 SUPERFAMILY Nucleotide-diphospho-sugar transferases 232 535 IPR029044 -
Aev04g2534 537 CDD GT8_like_1 232 525 - -
Aev04g2534 537 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 234 529 IPR029044 -
Aev04g2534 537 Coils Coil 158 178 - -
Aev04g2534 537 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 537 IPR029993 GO:0047262
Aev04g2534 537 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 3 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g2534 Aev-Chr4 25169880 25173386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g2534 1 537 Glycosyltransferase AT2G20810 77.222 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g2534 K13648 - gmx:100792018 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g2534 04 25169880 25173386 Aev04g2534 04 25169880 25173386 ECH
Aev10g2012 10 21282405 21284816 Aev04g2534 04 25169880 25173386 PCT