Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1970 ATGGCGGCTGCTTTTGTCATCGCCGTCGCGCTGCTGGTGGCGGTTGTTGCCGGATCTCCGCCGACGCTGACGCTGGAGAGGGCGTTTCCGACGAACCATGGAGTGGAGCTGAGTCAGCTCAGAGCTCGTGACATGTTGAGGCACAGAAGAATGTTGCAGCAGAGCACTAGCGGCGTAATTGATTTCTCTGTTCAAGGAACCTTCGATCCCTTCCAAGTTGGGCTCTACTTTACAAAGGTGCAGTTGGGAACTCCTCCAATTGAATTTAATGTGCAGATTGACACTGGCAGTGATGTTCTCTGGGTCAGCTGCACCTCCTGTAGTGGCTGTCCTCAGACAAGTGGCCTTCAGATTCAGCTCAATTTTTTCGACCCCAGTCATTCATCAACATCTTCATTGATCTCTTGTTCGGACCAAAGGTGCAACAATGGGATTCAATCATCAGAAGCTACTTGTTCCAGTCAGAGCAACCAATGCTCCTACAGTTTCGAGTATGGGGATGGCAGTGGTTCATCAGGCTACTATGTGTCGGATTTGATGCATTTCAATACTATTTTTGAAGGATCCGTGAGTACAAATTCTTCGGCACAAGTGGTTTTCGGTTGTAGCAACCAGCTAACTGAGGAATTGACAAAGTCTGATAGAGCAGTTGATGGAATATTTGGATTTGGGCAACAAAGCATGTCGGTCATCTCCCAGCTTTCGTCGCAAGGGGTAGCTCCAAGGGTGTTCTCCCATTGTCTGAAAGGAGATAGCAGTGGTGGGGGCATATTGGTTCTTGGTGAGATTGTGGAGCCAAATATGGTTTATACTTCACTTGTTCCATCGCAGCCCCATTACAATTTAAATCTCCAGAGCATCTCTGTCAATGGCCAGGCGTTGCAAATTGATTCTTCGGTTTTTACAACATCGAACAACAGAGGTACCATTGTTGATTCTGGAACAACTTTGGCATATCTGGCAGAAGAGGCTTTTGATCCCTTCGTCAACGCGATCACATCTGCAATTCCACAATCTGTACGTACTGTTGTTTCCAAGGGAAATCAGTGTTACTTAGTCACCAGCAGTGTCTCTGACATTTTTCCTCAAGTGAGTCTGAACTTTGCTGGTGGTGCATCCATGACTTTAAGACCACAGGACTACCTTATACAGCAGAATTCTATTGGTGGTGCAGCAGTATGGTGTATTGGCTTTCAGAAAACCGAGGGTCAAGGGATAACAATTCTTGGAGACCTTGTGTTAAAAGACAAGATTATTGTTTATGATCTTGCTGGTCAACGCATTGGATGGGCTCCTTATGACTGTTCCTCGTCGGTTAACGTCTCTGCGTCAACTGGCACCGGGAGAAGTGAATTCGTGAACGCTGGAGAGCTAAGTGGTGCGACTTCTTTGCTCGAAGGACTTCGCAAGTTGACACAGACAGGGTTCTTGGCTTTCTTAACACTGATTTGCTGCTACTTTGTACTTTTGTAG 1473 0.4671 MAAAFVIAVALLVAVVAGSPPTLTLERAFPTNHGVELSQLRARDMLRHRRMLQQSTSGVIDFSVQGTFDPFQVGLYFTKVQLGTPPIEFNVQIDTGSDVLWVSCTSCSGCPQTSGLQIQLNFFDPSHSSTSSLISCSDQRCNNGIQSSEATCSSQSNQCSYSFEYGDGSGSSGYYVSDLMHFNTIFEGSVSTNSSAQVVFGCSNQLTEELTKSDRAVDGIFGFGQQSMSVISQLSSQGVAPRVFSHCLKGDSSGGGILVLGEIVEPNMVYTSLVPSQPHYNLNLQSISVNGQALQIDSSVFTTSNNRGTIVDSGTTLAYLAEEAFDPFVNAITSAIPQSVRTVVSKGNQCYLVTSSVSDIFPQVSLNFAGGASMTLRPQDYLIQQNSIGGAAVWCIGFQKTEGQGITILGDLVLKDKIIVYDLAGQRIGWAPYDCSSSVNVSASTGTGRSEFVNAGELSGATSLLEGLRKLTQTGFLAFLTLICCYFVLL* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1970 490 CDD pepsin_A_like_plant 76 435 IPR034161 -
Aev10g1970 490 SUPERFAMILY Acid proteases 71 439 IPR021109 -
Aev10g1970 490 Gene3D Acid Proteases 53 262 IPR021109 -
Aev10g1970 490 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 3 452 - -
Aev10g1970 490 Gene3D Acid Proteases 263 442 IPR021109 -
Aev10g1970 490 PRINTS Pepsin (A1) aspartic protease family signature 407 422 IPR001461 GO:0004190|GO:0006508
Aev10g1970 490 PRINTS Pepsin (A1) aspartic protease family signature 309 320 IPR001461 GO:0004190|GO:0006508
Aev10g1970 490 PRINTS Pepsin (A1) aspartic protease family signature 82 102 IPR001461 GO:0004190|GO:0006508
Aev10g1970 490 PANTHER ASPARTYL PROTEASES 3 452 IPR001461 GO:0004190|GO:0006508
Aev10g1970 490 ProSiteProfiles Peptidase family A1 domain profile. 76 431 IPR033121 -
Aev10g1970 490 Pfam Xylanase inhibitor C-terminal 279 431 IPR032799 -
Aev10g1970 490 Pfam Xylanase inhibitor N-terminal 76 261 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1970 Aev-Chr10 21010997 21014479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1970 49 437 Miscellaneous Gene Families AT1G44130 26.485 1.28e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1970 - K00924 gmx:100791299 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1970 10 21010997 21014479 Aev10g1970 10 21010997 21014479 ECH
Aev10g1970 10 21010997 21014479 Aev04g2913 04 28913395 28918231 PCT